{"id":"W3012018132","doi":"10.1371/journal.ppat.1007969","title":"Klebsiella pneumoniae type VI secretion system-mediated microbial competition is PhoPQ controlled and reactive oxygen species dependent","year":2020,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":139,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Svenska Kulturfonden; National Taiwan University Hospital; China Scholarship Council; Queen's University; Biocenter Finland; Åbo Akademi; Orionin Tutkimussäätiö; Queen's University Belfast","keywords":"Type VI secretion system; Biology; Klebsiella pneumoniae; Microbiology; Effector; rpoS; Gene; Escherichia coli; Genetics; Cell biology; Gene expression; Virulence; Promoter","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002327845,0.0003651976,0.00040914,0.0002252088,0.0003631148,0.0006879849,0.000260971,0.0005017689,0.002745101],"category_scores_gemma":[0.0003893172,0.0002063237,0.000450878,0.0002235589,0.0002474822,0.0003908223,0.000721151,0.0004520962,0.000914699],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004937935,"about_ca_system_score_gemma":0.00058344,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001559828,"about_ca_topic_score_gemma":0.001382125,"domain_scores_codex":[0.9992551,0.00007978128,0.00004490236,0.0001473442,0.0002745747,0.0001982455],"domain_scores_gemma":[0.9995416,0.0000477793,0.0001725994,0.00002989413,0.0001181911,0.0000898324],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001565836,0.00005812294,0.003757173,0.0001572453,0.00001481159,0.0002108542,0.00004463126,0.0001147428,0.9921938,0.0002853208,0.0004866156,0.002520062],"study_design_scores_gemma":[0.00007938297,0.001274733,0.1983629,0.00006289137,0.00008143989,0.00385747,0.000814329,0.008143807,0.763576,0.001351565,0.02227486,0.0001207054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.987566,0.00249492,0.002946528,0.0005486903,0.00005678657,0.00006031505,0.0008439103,0.0001595568,0.005323252],"genre_scores_gemma":[0.995591,0.0005284085,0.0008794861,0.0001157216,0.000009865358,0.00002502728,0.0005486725,0.00001338942,0.002288493],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002745101,"threshold_uncertainty_score":0.009183228,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01722726395637442,"score_gpt":0.2234323835361962,"score_spread":0.2062051195798218,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}