{"id":"W3013029537","doi":"10.1101/2020.03.29.014746","title":"Renewable Fatty Acid Ester Production in <i>Clostridium</i>","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Office of Energy Efficiency; Alabama Agricultural Experiment Station; National Institute of Food and Agriculture; University of Illinois at Urbana-Champaign; U.S. Department of Agriculture; Auburn University; University of Waterloo; Aberystwyth University; Office of Energy Efficiency and Renewable Energy; U.S. Department of Energy","keywords":"Bioproduction; Clostridia; Metabolic engineering; Bioprocess; Biochemical engineering; Biofuel; Chemistry; Biotechnology; Biochemistry; Biology; Enzyme; Engineering; Bacteria","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003922014,0.0004758157,0.0004140117,0.000145657,0.00006103959,0.00008411684,0.0003582316,0.0006064365,0.000008293771],"category_scores_gemma":[0.0003295678,0.000526529,0.000132756,0.000382938,0.00006257043,0.00001129355,0.0003914689,0.0005499165,0.00002861836],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008295413,"about_ca_system_score_gemma":0.0002732772,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008128887,"about_ca_topic_score_gemma":0.00001066339,"domain_scores_codex":[0.9975125,0.00009502895,0.0004468285,0.001322141,0.0001879515,0.000435551],"domain_scores_gemma":[0.9983498,0.000001820029,0.0002123589,0.001073445,0.0002039267,0.0001586676],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005470661,0.00007844981,0.0008567998,0.0002502855,0.0000560487,0.000007909186,0.000003876678,0.0007509837,0.9958698,0.000006320945,0.002061639,0.000003205964],"study_design_scores_gemma":[0.0002725606,0.0000552035,0.004810343,0.0001368913,0.00004189385,6.165781e-8,0.000001137033,0.00002223704,0.9687219,8.464533e-7,0.0253834,0.0005535414],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9911544,0.002221284,0.001864156,0.0009218425,0.002926345,0.0006499587,0.00008828051,0.0001632566,0.00001046999],"genre_scores_gemma":[0.9913519,0.0008291832,0.004720288,0.0001778359,0.002677429,0.0001099779,0.000004014969,0.0001076714,0.00002171262],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02714789,"threshold_uncertainty_score":0.9997186,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01014377641151672,"score_gpt":0.201879463439444,"score_spread":0.1917356870279273,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}