{"id":"W3013210981","doi":"10.1128/mra.00091-20","title":"Whole-Genome Sequencing of Salmonella enterica Serovar Infantis and Kentucky Isolates Obtained from Layer Poultry Farms in Ecuador","year":2020,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Universidad Técnica de Ambato","keywords":"Salmonella enterica; Serotype; Biology; Genome; Salmonella; Microbiology; Gene; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002901136,0.0003690506,0.0003103187,0.000940115,0.0003476796,0.0005341399,0.0002089229,0.0001998312,0.00107683],"category_scores_gemma":[0.0006056423,0.0001505853,0.0002884312,0.001207496,0.0001312091,0.0002275689,0.0004234645,0.0002079636,0.0002985024],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000414928,"about_ca_system_score_gemma":0.0004480227,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01519486,"about_ca_topic_score_gemma":0.01766357,"domain_scores_codex":[0.9998289,0.00001657698,0.00002156667,0.00006597797,0.00002686966,0.00004006662],"domain_scores_gemma":[0.9996752,0.0000468877,0.0000995845,0.00002239858,0.0001060651,0.00004989752],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001910553,0.00019622,0.298095,0.0006805764,0.0003480471,0.002015758,0.004109556,0.001499537,0.6372616,0.0001951951,0.002543561,0.05114435],"study_design_scores_gemma":[0.0000242217,0.0001351963,0.9798018,0.00007535389,0.00008747893,0.0003414516,0.001501579,0.0005705648,0.00925047,0.00002878565,0.00817165,0.00001140782],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9877349,0.0003908431,0.0005830564,0.00004691858,0.000007109458,0.00002875497,0.01061163,0.00001872187,0.0005781305],"genre_scores_gemma":[0.9235867,0.0008893971,0.006964586,0.0001414231,0.0000124144,0.0001801066,0.06528664,0.00006294097,0.002875793],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01519486,"threshold_uncertainty_score":0.03021282,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02823586293788948,"score_gpt":0.2194429955384682,"score_spread":0.1912071326005787,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}