{"id":"W3013323180","doi":"10.2196/18606","title":"Emergence of a Novel Coronavirus (COVID-19): Protocol for Extending Surveillance Used by the Royal College of General Practitioners Research and Surveillance Centre and Public Health England","year":2020,"lang":"en","type":"article","venue":"JMIR Public Health and Surveillance","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of Oxford; National Institute for Health and Care Research; Royal College of General Practitioners","keywords":"Public health; Medicine; Pandemic; Public health surveillance; Outbreak; Coronavirus disease 2019 (COVID-19); Medical emergency; Environmental health; Virology; Pathology; Infectious disease (medical specialty); Disease","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.08377768,0.002688924,0.002973815,0.006443968,0.005433206,0.004089234,0.004834214,0.006360231,0.03024224],"category_scores_gemma":[0.08332673,0.003137367,0.00321111,0.006110635,0.00352577,0.003192369,0.005672683,0.006348789,0.01561727],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.006750359,"about_ca_system_score_gemma":0.02963772,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01082905,"about_ca_topic_score_gemma":0.01195557,"domain_scores_codex":[0.92754,0.03832586,0.0193522,0.004500389,0.006181158,0.004100309],"domain_scores_gemma":[0.9063339,0.01643426,0.01007062,0.01592986,0.04576138,0.005469931],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.04711407,0.01114589,0.0602036,0.03675368,0.000869195,0.005044475,0.02772858,0.005308321,0.03490749,0.02521944,0.4801477,0.2655575],"study_design_scores_gemma":[0.01394844,0.01201898,0.1210191,0.01189914,0.0004485276,0.001240164,0.005154844,0.002606204,0.00865489,0.003667115,0.8185741,0.0007683578],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"protocol","genre_gemma":"protocol","genre_scores_codex":[0.004573653,0.0003644539,0.009046394,0.0007224719,0.0004685991,0.9684368,0.00855399,0.0002500614,0.007583657],"genre_scores_gemma":[0.003978476,0.0003898143,0.01890138,0.0007037109,0.0001024778,0.9683427,0.005683671,0.0000432859,0.00185439],"genre_candidate":"protocol","genre_consensus":"protocol","teacher_disagreement_score":0.08377768,"threshold_uncertainty_score":0.443064,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.286490917826513,"score_gpt":0.4609254153183135,"score_spread":0.1744344974918005,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}