{"id":"W3013843138","doi":"10.1080/22221751.2020.1747363","title":"Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients","year":2020,"lang":"en","type":"article","venue":"Emerging Microbes & Infections","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":1188,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"National Science and Technology Major Project; Wuhan University; National Natural Science Foundation of China","keywords":"Bronchoalveolar lavage; Peripheral blood mononuclear cell; Transcriptome; Immunology; Immune system; Chemokine; CXCL10; Medicine; Cytokine; Biology; Gene; Gene expression; Lung; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002154939,0.0001841498,0.0004730348,0.0001542701,0.0001504993,0.00002149853,0.00008890746,0.00008976526,0.0002961341],"category_scores_gemma":[0.003715462,0.0001853196,0.0001456227,0.0002941558,0.0002142369,0.0001077879,0.000117318,0.0004229732,0.00001478191],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001161924,"about_ca_system_score_gemma":0.0001859717,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004939053,"about_ca_topic_score_gemma":0.00005013575,"domain_scores_codex":[0.9984997,0.00009973463,0.0005323261,0.0003652656,0.0001865836,0.0003164269],"domain_scores_gemma":[0.9987745,0.000474289,0.00009008909,0.000189554,0.0001079656,0.0003636129],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003097565,0.001457167,0.5612859,0.001801275,0.0003005681,0.00003532802,0.007868937,0.0002301708,0.4218838,0.00002462128,0.002356916,0.002445573],"study_design_scores_gemma":[0.0217184,0.004975588,0.7237844,0.0008126608,0.001015007,0.000008849164,0.0007516344,0.002933585,0.02302963,0.000100365,0.2197982,0.001071688],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9942654,0.0002276802,0.000756068,0.003889157,0.0001123682,0.0004727737,0.00009888565,0.00007597494,0.0001016787],"genre_scores_gemma":[0.9952525,0.001776376,0.0002060615,0.002524054,0.00009083471,0.0000177645,0.00002423248,0.00003101178,0.00007716044],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3988542,"threshold_uncertainty_score":0.7557115,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01984724486266042,"score_gpt":0.3231017570765524,"score_spread":0.303254512213892,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}