{"id":"W3013934097","doi":"10.1128/mra.00033-20","title":"Complete Genome Sequence of Acidithiobacillus ferridurans JAGS, Isolated from Acidic Mine Drainage","year":2020,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Metal Extraction and Bioleaching","field":"Engineering","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; University of Toronto","funders":"Office of Energy Efficiency; Office of Energy Efficiency and Renewable Energy; Lawrence Livermore National Laboratory; Ontario Research Foundation; U.S. Department of Energy","keywords":"GC-content; Whole genome sequencing; Genome; Gene; Acidithiobacillus ferrooxidans; Sequence (biology); Biology; Computational biology; Chemistry; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001840162,0.00075598,0.0005766175,0.001261216,0.0004218776,0.0006349691,0.0003305196,0.0004928283,0.00189654],"category_scores_gemma":[0.0004866962,0.0002507604,0.0005073698,0.001858083,0.0002627231,0.0003638908,0.0002886689,0.0005805071,0.001148973],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003163129,"about_ca_system_score_gemma":0.001336555,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00513877,"about_ca_topic_score_gemma":0.003966132,"domain_scores_codex":[0.9998623,0.00001209579,0.0000180874,0.00003682752,0.00005086954,0.0000197363],"domain_scores_gemma":[0.9997128,0.00005161748,0.00006323982,0.00002350727,0.00008267683,0.00006610634],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001108904,0.0001260401,0.00506563,0.0009201869,0.00004303078,0.0004492383,0.0003162929,0.0008786294,0.9607022,0.00026176,0.001691633,0.02843623],"study_design_scores_gemma":[0.0004123878,0.002128628,0.452205,0.0004620388,0.001006451,0.003875929,0.001394714,0.005477491,0.2627395,0.001154714,0.2689214,0.0002217138],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8074893,0.005300378,0.01336358,0.0006848645,0.0002077261,0.000257944,0.1674844,0.0006118606,0.004599873],"genre_scores_gemma":[0.4604256,0.005771423,0.03768614,0.0002227718,0.0001141861,0.0002379468,0.4881694,0.000244909,0.007127602],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00513877,"threshold_uncertainty_score":0.01021767,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03549783532951328,"score_gpt":0.2258298419073427,"score_spread":0.1903320065778294,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}