{"id":"W3014007372","doi":"10.3390/cells9040813","title":"Single-Cell Protein and RNA Expression Analysis of Mononuclear Phagocytes in Intestinal Mucosa and Mesenteric Lymph Nodes of Ulcerative Colitis and Crohn’s Disease Patients","year":2020,"lang":"en","type":"review","venue":"Cells","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Ulcerative colitis; Mesenteric lymph nodes; Medicine; Crohn's disease; Intestinal mucosa; Pathology; Lymph; Crohn disease; Cell; Peripheral blood mononuclear cell; Disease; Immunology; Biology; Internal medicine; Immune system","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0000678912,0.0002778191,0.0007918762,0.0001545713,0.00002602372,0.00002211123,0.0001023688,0.0001235184,0.00001021392],"category_scores_gemma":[0.00009065225,0.0002492051,0.0001483348,0.0001560273,0.0001890135,0.000007126644,0.0002569557,0.00006830308,4.814128e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002063751,"about_ca_system_score_gemma":0.00009822357,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008315738,"about_ca_topic_score_gemma":0.000003828219,"domain_scores_codex":[0.9985885,0.0002274359,0.0004776428,0.0004528139,0.00011088,0.0001427117],"domain_scores_gemma":[0.9990956,0.00002854429,0.0004074899,0.0002055425,0.00007879027,0.000184092],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.004371353,0.002710664,0.03617733,0.110789,0.002315622,0.0009700089,0.001401005,0.00002874688,0.1613338,0.00002259211,0.0002330799,0.6796467],"study_design_scores_gemma":[0.01703765,0.002378503,0.5295355,0.05704282,0.02838799,0.00001616031,0.001054039,0.002312301,0.2779262,0.0001259362,0.07736827,0.006814521],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"review","genre_scores_codex":[0.6385311,0.3605107,0.00001129795,0.000001465894,0.00001227022,0.0005497627,0.000328885,0.000002874423,0.00005164288],"genre_scores_gemma":[0.4987762,0.5003458,0.0003492397,0.00001199839,0.0000305901,0.00006597776,0.000325314,0.00004274472,0.00005212117],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.6728323,"threshold_uncertainty_score":0.999996,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01223330322024308,"score_gpt":0.2435838737441052,"score_spread":0.2313505705238622,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}