{"id":"W3014710260","doi":"10.1371/journal.pntd.0008105","title":"Dual RNA-Seq characterization of host and pathogen gene expression in liver cells infected with Crimean-Congo Hemorrhagic Fever Virus","year":2020,"lang":"en","type":"article","venue":"PLoS neglected tropical diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Université Laval; University of Manitoba; Public Health Agency of Canada; University of Toronto; Toronto General Hospital; University Health Network; University of Prince Edward Island; Health Sciences Centre; Western University; Sunnybrook Health Science Centre","funders":"Canadian Institutes of Health Research; Public Health Agency; Public Health Agency of Canada","keywords":"Biology; Viral quasispecies; Virology; Virus; Viral replication; Gene; Viral pathogenesis; Hepatitis C virus; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022826,0.000281565,0.0005532422,0.0004080579,0.0004742036,0.000665156,0.0002272081,0.0004138111,0.0008507148],"category_scores_gemma":[0.0003079591,0.0002006763,0.0003959108,0.0004129036,0.0002573539,0.0001761423,0.0002759434,0.0005696187,0.0004012924],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003153365,"about_ca_system_score_gemma":0.0002784395,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003055118,"about_ca_topic_score_gemma":0.005235771,"domain_scores_codex":[0.9997981,0.00001482602,0.00000828349,0.00008201978,0.00005514199,0.00004147699],"domain_scores_gemma":[0.9998691,0.00004569011,0.00001663273,0.000008556586,0.00004273098,0.00001714474],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006133613,0.00007739515,0.01816115,0.0004412672,0.00009106081,0.0003555776,0.0004918758,0.002806899,0.9645211,0.0003156646,0.001783101,0.01034142],"study_design_scores_gemma":[0.00006610772,0.0005683334,0.2924986,0.0001283245,0.0002732461,0.001063174,0.001910412,0.07031406,0.6048571,0.001037283,0.02711018,0.000173082],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9660457,0.002090423,0.01211813,0.0002387265,0.0001176505,0.0000653264,0.01582474,0.0003280168,0.003171226],"genre_scores_gemma":[0.9447399,0.001506814,0.02343329,0.0008666579,0.00006246426,0.0003966729,0.02466834,0.0002938549,0.004031943],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003055118,"threshold_uncertainty_score":0.006074667,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01714537113671405,"score_gpt":0.21811149487047,"score_spread":0.2009661237337559,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}