{"id":"W3014857061","doi":"10.1186/s12920-020-0704-3","title":"E. coli diversity: low in colorectal cancer","year":2020,"lang":"en","type":"article","venue":"BMC Medical Genomics","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China","keywords":"Biology; Escherichia coli; Pulsed-field gel electrophoresis; Genotype; Microbiology; Commensalism; Genome; Host (biology); Genetics; Pathogenic Escherichia coli; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002693433,0.0001901169,0.000352824,0.001455886,0.000577034,0.0007396173,0.0002557668,0.000679305,0.00183532],"category_scores_gemma":[0.002094652,0.0001560181,0.0001669161,0.001425188,0.0004231445,0.0003679291,0.000551541,0.0004565541,0.0002393284],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002947452,"about_ca_system_score_gemma":0.0002069056,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001812981,"about_ca_topic_score_gemma":0.002163014,"domain_scores_codex":[0.999674,0.00006581342,0.00003152036,0.00009315558,0.00006101868,0.00007458078],"domain_scores_gemma":[0.9986313,0.000227957,0.0005258672,0.00006534752,0.000222536,0.0003270132],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002616743,0.00002114671,0.9917368,0.00006767715,0.00003064795,0.0002362176,0.0000743573,0.00003410376,0.002553002,0.00003066101,0.0001747979,0.004778837],"study_design_scores_gemma":[0.000002838062,0.00009327154,0.9978009,0.00001514541,0.00001988462,0.0008806467,0.0001806194,0.00007310697,0.0003086204,0.00009189225,0.0005297385,0.00000331234],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956975,0.002616365,0.0002043071,0.0001979995,0.0000167264,0.000009652917,0.0003369231,0.00001219618,0.000908275],"genre_scores_gemma":[0.9990527,0.0003578291,0.0001847394,0.00004721409,0.00001738145,0.000003998219,0.0002127062,0.000002467778,0.0001209977],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00183532,"threshold_uncertainty_score":0.006139755,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02758347124608009,"score_gpt":0.284420012167905,"score_spread":0.256836540921825,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}