{"id":"W3014948557","doi":"10.1101/2020.04.02.019711","title":"Integrated analysis of cervical squamous cell carcinoma cohorts from three continents reveals conserved subtypes of prognostic significance","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"Medical Research Council; University College London Hospitals NHS Foundation Trust; University of Kent; Biotechnology and Biological Sciences Research Council; Rosetrees Trust; Prostate Cancer UK; Cancer Research UK; Pancreatic Cancer UK","keywords":"Biology; Cervical cancer; Clade; Disease; Cancer research; Oncology; Cancer; Gene; Internal medicine; Medicine; Phylogenetics; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001030347,0.0003617121,0.0007703067,0.001628527,0.0007318109,0.00131105,0.0004139604,0.0004441303,0.001562476],"category_scores_gemma":[0.002212596,0.0001924758,0.0008927743,0.001935185,0.0003027508,0.0002594938,0.001375884,0.0004545451,0.0003890169],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003087172,"about_ca_system_score_gemma":0.0004524483,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005643525,"about_ca_topic_score_gemma":0.006758552,"domain_scores_codex":[0.99932,0.0001571891,0.00004959321,0.000242246,0.000120249,0.0001107827],"domain_scores_gemma":[0.9988794,0.0002335907,0.0002400118,0.0002758646,0.0001971476,0.000173905],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006444411,0.00002856536,0.9779474,0.00004113601,0.0009397179,0.000130658,0.0002451895,0.0001999797,0.009198405,0.00005934413,0.0007811131,0.009784174],"study_design_scores_gemma":[0.000009574955,0.00005249308,0.9978096,0.000008353863,0.000203828,0.0001989455,0.0002419834,0.0002734672,0.0005082455,0.00006184801,0.0006256954,0.000006005813],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954864,0.000498296,0.0005891714,0.0001343619,0.00001519325,0.00001637701,0.002735652,0.00003552048,0.0004888687],"genre_scores_gemma":[0.9952057,0.0001783023,0.000477746,0.0000708463,0.00001396333,0.00002185317,0.003780962,0.00002194419,0.0002286663],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005643525,"threshold_uncertainty_score":0.01122135,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03105959120191763,"score_gpt":0.2600601717009721,"score_spread":0.2290005804990544,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}