{"id":"W3015340109","doi":"10.1128/mra.00168-20","title":"Whole-Genome Draft Assemblies of Difficult-to-Classify Escherichia coli O157 and Non-O157 Isolates from Feces of Canadian Feedlot Cattle","year":2020,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture Food and Rural Development; Alberta Ministry of Agriculture and Forestry; Agriculture and Agri-Food Canada","funders":"Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Alberta Agriculture and Forestry","keywords":"Escherichia coli; Feces; Shiga toxin; Biology; Genome; Feedlot; Microbiology; Genetics; Gene; Animal science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009734473,0.001192563,0.001043998,0.002725435,0.002026651,0.001712901,0.0009130347,0.0006273806,0.003518248],"category_scores_gemma":[0.002185139,0.0006112354,0.001136725,0.004159411,0.0004475607,0.0005465627,0.0006659863,0.0008549339,0.001307091],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003079836,"about_ca_system_score_gemma":0.008087148,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.26938,"about_ca_topic_score_gemma":0.4803216,"domain_scores_codex":[0.999552,0.00002940906,0.00003326907,0.0001444635,0.0001443516,0.00009660779],"domain_scores_gemma":[0.9990329,0.0001655981,0.00009347492,0.00006241386,0.0004919642,0.0001536517],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.005288498,0.000355786,0.05166863,0.006464123,0.001166315,0.00267718,0.005853454,0.0176634,0.7538911,0.001672677,0.030631,0.1226679],"study_design_scores_gemma":[0.000376436,0.000932509,0.6939051,0.001106724,0.00245246,0.001357667,0.005402589,0.0264012,0.07296567,0.001767516,0.1929684,0.0003637151],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5498372,0.003259048,0.01609596,0.0003889767,0.0001458973,0.0004851368,0.4223598,0.001808803,0.005619167],"genre_scores_gemma":[0.2161049,0.002492158,0.05745371,0.0001728645,0.0000293572,0.0003967605,0.7150043,0.0008893145,0.007456677],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.73062,"threshold_uncertainty_score":0.535624,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01558229257548107,"score_gpt":0.2364351124266749,"score_spread":0.2208528198511938,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}