{"id":"W3016187519","doi":"10.3389/fimmu.2020.00645","title":"The Bacterium Akkermansia muciniphila: A Sentinel for Gut Permeability and Its Relevance to HIV-Related Inflammation","year":2020,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":126,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Centre Hospitalier de l’Université de Montréal; McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; National Science and Technology Major Project; Pfizer","keywords":"Akkermansia muciniphila; Dysbiosis; Gut flora; Medicine; Akkermansia; Immunology; Inflammation; Diabetes mellitus; Metformin; Intestinal permeability; Biology; Lactobacillus; Bacteria; Endocrinology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003522827,0.0003811663,0.000329413,0.0007132171,0.0005316353,0.001456951,0.0003137543,0.001111891,0.00102493],"category_scores_gemma":[0.0006708222,0.0001830298,0.0002999193,0.0003793958,0.0006932717,0.001116025,0.000961326,0.0008338665,0.0002155528],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003719612,"about_ca_system_score_gemma":0.0003999753,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009269186,"about_ca_topic_score_gemma":0.0004922985,"domain_scores_codex":[0.9997606,0.00006559741,0.00001550024,0.00004593447,0.00004184535,0.00007054373],"domain_scores_gemma":[0.999649,0.0000476451,0.0001511339,0.00001094648,0.00004916745,0.00009198567],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002087741,0.0004709865,0.1027419,0.007641451,0.000329921,0.01051588,0.003271484,0.0009982715,0.6052142,0.01726469,0.01328047,0.2361831],"study_design_scores_gemma":[0.0001966747,0.00320383,0.4114629,0.004819171,0.0009714376,0.05083516,0.01305442,0.00943143,0.1674779,0.03198324,0.3061006,0.0004631425],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"review","genre_scores_codex":[0.5224321,0.4526832,0.004284829,0.01083267,0.001393206,0.00008958141,0.0004192205,0.0001606933,0.007704525],"genre_scores_gemma":[0.9230576,0.07098209,0.002291935,0.001141551,0.000882531,0.00003580586,0.0001883897,0.000008674295,0.001411421],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.001456951,"threshold_uncertainty_score":0.003428757,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01137197518050192,"score_gpt":0.2745161317518276,"score_spread":0.2631441565713257,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}