{"id":"W3016231335","doi":"10.3389/fcimb.2020.00137","title":"Microbiotyping the Sinonasal Microbiome","year":2020,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Sinusitis and nasal conditions","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Microbiome; Moraxella; Biology; Sinus (botany); Human microbiome; Computational biology; Human Microbiome Project; Microbiology; Bioinformatics; Bacteria; Genetics; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001111226,0.0001302394,0.0002447372,0.0001190702,0.0001290117,0.00001823148,0.00004741805,0.0001541618,0.00009326512],"category_scores_gemma":[0.00002968169,0.00009962234,0.00008125658,0.0002872992,0.000218993,0.00004892367,0.00004670325,0.0002898432,0.00003219599],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004376219,"about_ca_system_score_gemma":0.0000378287,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004017167,"about_ca_topic_score_gemma":0.000006361917,"domain_scores_codex":[0.9992085,0.00008043284,0.0002140248,0.0002643885,0.00001880747,0.0002138243],"domain_scores_gemma":[0.9997144,0.0000214763,0.00005017797,0.0001088224,0.00003338399,0.00007174412],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007026807,0.00004448866,0.0867381,0.00003495745,0.00004470986,0.00001960339,0.0002131563,0.000002209508,0.88481,0.00005922043,0.02697545,0.0009878817],"study_design_scores_gemma":[0.006557757,0.001044185,0.09370802,0.0001380248,0.0002563891,0.001656647,0.0004726399,0.0005175466,0.2278394,0.0001375253,0.6669776,0.0006942193],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9850863,0.002227732,0.0080855,0.00277744,0.0008210409,0.0003278974,0.00002881406,0.00005261768,0.0005926874],"genre_scores_gemma":[0.9937937,0.0002296808,0.001004643,0.004425397,0.0001989755,0.000007554947,0.0001682488,0.00001587143,0.000155968],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6569705,"threshold_uncertainty_score":0.4062481,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01214221673032719,"score_gpt":0.2208031792534534,"score_spread":0.2086609625231262,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}