{"id":"W3016245835","doi":"10.1101/2020.04.09.017285","title":"Innovation, conservation and repurposing of gene function in plant root cell type development","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Repurposing; Arabidopsis; Gene; Meristem; Cell type; Chromatin; Gene regulatory network; Function (biology); Cell biology; Computational biology; Botany; Cell; Genetics; Gene expression; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004323688,0.000137357,0.000229033,0.0004605929,0.0002010477,0.0004302114,0.0001559822,0.0001996592,0.003887869],"category_scores_gemma":[0.0005233443,0.0001067025,0.0001726091,0.0003003963,0.0003337325,0.0004376163,0.0002818002,0.0003440273,0.0007943363],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002060559,"about_ca_system_score_gemma":0.0001459579,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002947941,"about_ca_topic_score_gemma":0.0005784484,"domain_scores_codex":[0.9998142,0.0000186537,0.00001155815,0.00008515215,0.00005430195,0.0000160991],"domain_scores_gemma":[0.9994574,0.0001943463,0.00009451181,0.00008948122,0.00009600235,0.00006828705],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003864442,0.00001963289,0.01423496,0.0002232427,0.00002678334,0.0004540936,0.0002539746,0.0002627924,0.9522181,0.002053814,0.003419735,0.02644655],"study_design_scores_gemma":[0.00005138958,0.0004010598,0.4120928,0.00006289559,0.00009916772,0.004138257,0.0007313715,0.003950363,0.5147351,0.004693387,0.05895575,0.00008850756],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9600818,0.00355142,0.0197315,0.001092966,0.0002741191,0.00002850226,0.004656855,0.0005353792,0.01004736],"genre_scores_gemma":[0.967552,0.001477608,0.01083356,0.0004022949,0.0001966819,0.00004133094,0.005492902,0.0003122306,0.01369148],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003887869,"threshold_uncertainty_score":0.01300621,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03093204560687028,"score_gpt":0.2137808526294347,"score_spread":0.1828488070225644,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}