{"id":"W3016830892","doi":"10.1139/gen-2019-0161","title":"Genetic and molecular features for hepadnavirus and plague infections in the Himalayan marmot","year":2020,"lang":"en","type":"article","venue":"Genome","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Marmot; Virology; Gene; Plague (disease); Major histocompatibility complex; Immune system; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008613731,0.0001811015,0.00013471,0.0006628158,0.0003712074,0.0002085559,0.00009436232,0.0002415032,0.0008683645],"category_scores_gemma":[0.0001498628,0.000118615,0.0002058307,0.0003132447,0.0003010908,0.0001236075,0.0001954211,0.000187223,0.0001083518],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001945564,"about_ca_system_score_gemma":0.0000870823,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001247327,"about_ca_topic_score_gemma":0.001143421,"domain_scores_codex":[0.9998956,0.00001672459,0.00001204087,0.00003108961,0.00002110203,0.00002350772],"domain_scores_gemma":[0.9998935,0.00001142497,0.00004775224,0.000007826424,0.000006585345,0.00003282045],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006163274,0.00008953748,0.04591491,0.00006460943,0.00005959558,0.002892846,0.0004782932,0.0001112531,0.9469499,0.0003623261,0.00004899245,0.002411368],"study_design_scores_gemma":[0.00001698872,0.0003643813,0.9694094,0.000009623951,0.0000758984,0.007650692,0.0004762771,0.0004446649,0.0203682,0.0002402619,0.0009314963,0.00001209008],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994196,0.0001304704,0.0001076068,0.000008629212,0.000001463576,0.000005615917,0.00008993732,0.000003039167,0.00023374],"genre_scores_gemma":[0.9993081,0.0001169468,0.0001484222,0.00001191179,0.00000387436,0.000008776286,0.0002147174,0.000001493981,0.000185666],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001247327,"threshold_uncertainty_score":0.002904892,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01322826035116485,"score_gpt":0.2666264674097806,"score_spread":0.2533982070586157,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}