{"id":"W3017647226","doi":"10.1093/ecco-jcc/jjaa084","title":"A Diversified Dietary Pattern Is Associated With a Balanced Gut Microbial Composition of Faecalibacterium and Escherichia/Shigella in Patients With Crohn’s Disease in Remission","year":2020,"lang":"en","type":"article","venue":"Journal of Crohn s and Colitis","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"ca_institutions":"Women and Children’s Health Research Institute; University of Calgary; University of Alberta","funders":"Crohn's and Colitis Foundation","keywords":"Medicine; Internal medicine; Feces; Gastroenterology; Shigella; Gut flora; Crohn's disease; Calprotectin; Faecalibacterium prausnitzii; Faecal calprotectin; Escherichia coli; Animal science; Disease; Inflammatory bowel disease; Microbiology; Biology; Immunology; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002905736,0.0002191608,0.0004562043,0.0002337375,0.0003540014,0.000328776,0.0001446308,0.0002404479,0.0006600866],"category_scores_gemma":[0.0005515866,0.0001310618,0.0001769161,0.0003159892,0.0002697645,0.0001091555,0.0001957844,0.0003117943,0.00006103062],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000370281,"about_ca_system_score_gemma":0.0003965552,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007858789,"about_ca_topic_score_gemma":0.01445833,"domain_scores_codex":[0.9998504,0.00004035363,0.00001705398,0.00003055364,0.00003082969,0.00003077737],"domain_scores_gemma":[0.9996213,0.00005371287,0.000124635,0.00002141869,0.00004581747,0.0001331886],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.02199078,0.001919609,0.9416804,0.0001917729,0.0002669022,0.0001945345,0.0003390144,0.0000868823,0.01380463,0.00001190445,0.0001603755,0.01935313],"study_design_scores_gemma":[0.0002250134,0.00288074,0.9961904,0.000008547354,0.00006814314,0.0001043541,0.0001232863,0.00006959737,0.0001987891,0.000006541127,0.0001221014,0.000002439797],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996952,0.000190206,0.00001261541,0.0000130691,0.000003263111,0.000007919192,0.00001718037,0.000001311608,0.00005940233],"genre_scores_gemma":[0.9996668,0.00007631319,0.00008123606,0.00001969594,0.000003160127,0.000004942292,0.00007112039,4.646359e-7,0.00007625172],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007858789,"threshold_uncertainty_score":0.01562607,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007145131518697691,"score_gpt":0.2091688789462779,"score_spread":0.2020237474275802,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}