{"id":"W3018694567","doi":"10.1099/mic.0.000913","title":"A response regulator protein with antar domain, AvnR, in Acinetobacter baumannii ATCC 17978 impacts its virulence and amino acid metabolism","year":2020,"lang":"en","type":"article","venue":"Microbiology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Virulence; Response regulator; Acinetobacter baumannii; Biofilm; Mutant; Microbiology; Gene; Phenotype; Regulator; Genetics; Biochemistry; Bacteria; Pseudomonas aeruginosa","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002664739,0.0003148005,0.000394642,0.00005911528,0.00005862806,0.00003007755,0.0002661454,0.0003094056,0.00004303951],"category_scores_gemma":[0.000135047,0.0002560025,0.00004973239,0.0001472295,0.0002930387,0.0000134128,0.0002013869,0.000177383,0.00002654503],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002260979,"about_ca_system_score_gemma":0.0001106965,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001037283,"about_ca_topic_score_gemma":0.00007596025,"domain_scores_codex":[0.9980897,0.0003255157,0.0003233739,0.0007215551,0.00004838029,0.0004914163],"domain_scores_gemma":[0.9992501,0.00001653908,0.0001453926,0.0003621413,0.00006968066,0.0001561538],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.005139114,0.00003238129,0.005481426,0.00004106026,0.00004982101,0.00004928616,0.0002186205,9.25006e-7,0.9882866,0.00003004449,0.0006031333,0.00006759207],"study_design_scores_gemma":[0.001617515,0.0006783291,0.06286792,0.0000610639,0.00001573915,0.0001563334,0.00009058053,0.000002078937,0.8906018,0.000011331,0.04353802,0.0003592625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958597,0.00172866,0.0001116275,0.001572614,0.00005062074,0.0005174406,0.0001048306,0.00001976529,0.00003472432],"genre_scores_gemma":[0.9958019,0.0001000815,0.002150115,0.00147607,0.0001115736,0.00001671222,0.0001040534,0.00003765162,0.0002017914],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09768477,"threshold_uncertainty_score":0.9999892,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006413663046025472,"score_gpt":0.2090978335749397,"score_spread":0.2026841705289142,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}