{"id":"W3019485462","doi":"10.1101/2020.04.25.060590","title":"Heterologous production of 1-tuberculosinyladenosine in <i>Mycobacterium kansasii</i> models pathoevolution towards the transcellular lifestyle of <i>Mycobacterium tuberculosis</i>","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Mycobacterium kansasii; Mycobacterium tuberculosis; Tuberculosis; Mycobacterium; Biology; Microbiology; Virulence; Complementation; Most recent common ancestor; Gene; Phenotype; Virology; Genetics; Bacteria; Medicine; Phylogenetic tree; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001730568,0.0002526105,0.0001519384,0.0001134515,0.000124961,0.0002559823,0.0002481061,0.000271965,0.0004660102],"category_scores_gemma":[0.00009694442,0.0001167541,0.0001639743,0.0001414436,0.0001521724,0.0001126003,0.000208013,0.0004363521,0.0003003723],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003215469,"about_ca_system_score_gemma":0.0001335972,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001142231,"about_ca_topic_score_gemma":0.001158542,"domain_scores_codex":[0.9998735,0.00003199837,0.00001528429,0.00002654889,0.00002751818,0.0000251379],"domain_scores_gemma":[0.9998654,0.00002271456,0.00005284126,0.00002291428,0.00001134392,0.00002480925],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004366195,0.00002205056,0.00009933627,0.00001683312,0.000001336968,0.00002354462,0.0000130085,0.00006468275,0.9994465,0.00006947778,0.000009923046,0.0001897618],"study_design_scores_gemma":[0.00001321975,0.0004275568,0.00204809,0.000008304056,0.00001025418,0.0001577674,0.0000460148,0.001438669,0.993413,0.00003544623,0.002396864,0.000004632803],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995699,0.000349412,0.002481161,0.00004703537,0.00002170388,0.00002962531,0.0003572815,0.0000487862,0.0009659419],"genre_scores_gemma":[0.9946871,0.0002450592,0.002872565,0.00002109333,0.00000490121,0.00001986841,0.0005408499,0.00001756311,0.001591091],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001142231,"threshold_uncertainty_score":0.002333045,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02352050759377165,"score_gpt":0.2352074376969089,"score_spread":0.2116869301031373,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}