{"id":"W3019927786","doi":"10.1093/neuonc/nou206.58","title":"EPIGENOME ALTERATIONS DEFINE LETHAL CIMP POSITIVE EPENDYMOMAS OF INFANCY","year":2014,"lang":"en","type":"article","venue":"Neuro-Oncology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Epigenetics; Biology; Epigenome; Atypical teratoid rhabdoid tumor; DNA methylation; CpG site; Genetics; Cancer research; Exome sequencing; Mutation; Medulloblastoma; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001032554,0.000189996,0.0001693608,0.0006000546,0.0001281833,0.0001631894,0.0001454663,0.0001743017,0.001180345],"category_scores_gemma":[0.00038017,0.00009291511,0.00009498181,0.0002980687,0.0002239781,0.000103283,0.0003136066,0.00013575,0.0001660686],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001751813,"about_ca_system_score_gemma":0.00009271703,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005700481,"about_ca_topic_score_gemma":0.0009361276,"domain_scores_codex":[0.9999288,0.000008049542,0.000006534515,0.00001852277,0.00002065547,0.00001739474],"domain_scores_gemma":[0.9998729,0.00003732363,0.00004834681,0.000007763862,0.00001155324,0.00002196879],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007779943,0.00004885172,0.3968911,0.0001148945,0.00005355915,0.01291656,0.0005674614,0.0004227492,0.5668965,0.0004581138,0.0002644151,0.02058769],"study_design_scores_gemma":[0.000005913877,0.0001588037,0.9410424,0.000007129525,0.00003484254,0.0192337,0.0001961044,0.0003169772,0.03750657,0.0001763838,0.001316176,0.000004969043],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983804,0.0002445245,0.000519773,0.000009071766,0.000001300013,0.000007525163,0.0001794002,0.00001171835,0.0006462163],"genre_scores_gemma":[0.9984964,0.0002142404,0.000697105,0.000009378139,0.000002307211,0.00001156977,0.0003217362,0.000006758422,0.0002404959],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001180345,"threshold_uncertainty_score":0.003948689,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01215495661759549,"score_gpt":0.2810068465490747,"score_spread":0.2688518899314792,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}