{"id":"W3020225637","doi":"10.1016/j.bjid.2020.03.002","title":"Mobile genetic elements associated with carbapenemase genes in South American Enterobacterales","year":2020,"lang":"en","type":"review","venue":"The Brazilian Journal of Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Ontario; University of Toronto; Toronto Public Health","funders":"Universidad San Francisco de Quito","keywords":"Klebsiella pneumoniae; Mobile genetic elements; Plasmid; Biology; Transposable element; Microbiology; Gene; Genome; Genetics; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003869246,0.0003046827,0.00059438,0.004786371,0.0002136912,0.0007592682,0.0002565159,0.0003631051,0.001408455],"category_scores_gemma":[0.001380066,0.0001517551,0.0006049284,0.007226822,0.00027166,0.0006934782,0.0003511886,0.0002124947,0.0002025545],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003410883,"about_ca_system_score_gemma":0.00140051,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003756306,"about_ca_topic_score_gemma":0.007357487,"domain_scores_codex":[0.9995887,0.00005628839,0.0001541165,0.00006038425,0.0001203916,0.00002027014],"domain_scores_gemma":[0.9987944,0.0004796435,0.0004577305,0.00001916608,0.0002192942,0.0000296781],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003287923,0.00008503468,0.02507208,0.2355909,0.0008557833,0.003072002,0.002867668,0.000340014,0.02844697,0.0007834106,0.005680346,0.6968769],"study_design_scores_gemma":[0.00006219128,0.0006129197,0.2565073,0.0776339,0.007219208,0.01785678,0.005293006,0.0001894233,0.008785905,0.001030325,0.6246883,0.0001207738],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.02173472,0.9757274,0.0002154497,0.0003334105,0.00008082639,0.00001882507,0.0005363972,0.00001014377,0.001342738],"genre_scores_gemma":[0.03066334,0.9675358,0.0006295601,0.0002207076,0.0000586379,0.00001735086,0.0004891591,0.000003207818,0.0003823475],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.004786371,"threshold_uncertainty_score":0.007468879,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008469795958676819,"score_gpt":0.2685116626862982,"score_spread":0.2600418667276214,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}