{"id":"W3020364650","doi":"10.3390/pathogens9040309","title":"Resistance of Tick Gut Microbiome to Anti-Tick Vaccines, Pathogen Infection and Antimicrobial Peptides","year":2020,"lang":"en","type":"article","venue":"Pathogens","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Ixodes scapularis; Biology; Microbiome; Microbiology; Tick; Borrelia burgdorferi; Anaplasma phagocytophilum; Antimicrobial peptides; Ixodes; Pathogen; Tick-borne disease; Immunity; Borrelia; Antimicrobial; Virology; Immune system; Ixodidae; Immunology; Antibody; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001350555,0.0002731542,0.000466106,0.0001533604,0.0001577368,0.00002317571,0.0001520718,0.0001949546,0.0001595463],"category_scores_gemma":[0.0002999564,0.0002759523,0.0001342336,0.000415443,0.0001240546,0.0000934453,0.0001628926,0.0001608276,0.000366404],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003622401,"about_ca_system_score_gemma":0.0000695702,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000908821,"about_ca_topic_score_gemma":0.0001315142,"domain_scores_codex":[0.9984471,0.0001791324,0.0004207646,0.0005240078,0.00003877969,0.0003902682],"domain_scores_gemma":[0.9991924,0.00008659132,0.0001702446,0.0002937357,0.0001609384,0.00009607705],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001414322,0.0001180948,0.06798407,0.0001443226,0.0001274901,0.00001469917,0.0004735015,0.00001568236,0.9232585,0.00008692552,0.007246584,0.0003887018],"study_design_scores_gemma":[0.001813091,0.0004542763,0.4115487,0.000130189,0.0003210189,0.0001496135,0.00007825786,0.000003672018,0.5306177,0.00004219002,0.0541944,0.000646899],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958225,0.001382036,0.0002819134,0.0005561086,0.0003605827,0.000428646,0.000730191,0.0001556539,0.0002823641],"genre_scores_gemma":[0.9982588,0.0001911858,0.0003364603,0.0007345587,0.00009032624,0.00001603043,0.0001309216,0.00004002711,0.0002016515],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3926408,"threshold_uncertainty_score":0.9999692,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01200506894173251,"score_gpt":0.2254540235923552,"score_spread":0.2134489546506227,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}