{"id":"W3020729888","doi":"10.3389/fmicb.2020.00706","title":"Mitochondrial Genome Polymorphisms in the Human Pathogenic Fungus Cryptococcus neoformans","year":2020,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Mitochondrial DNA; Genetics; Clade; Gene; Cryptococcus neoformans; Genome; Intron; Ploidy; Phylogenetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001336853,0.0001710498,0.000116175,0.0007213088,0.0002312267,0.0002018798,0.00009262264,0.0002569369,0.001039992],"category_scores_gemma":[0.0004548149,0.0001054663,0.0001766678,0.0005223973,0.0001335361,0.00007039523,0.000170592,0.0002491541,0.0001527082],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001868479,"about_ca_system_score_gemma":0.00009481963,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001809957,"about_ca_topic_score_gemma":0.003764904,"domain_scores_codex":[0.9998362,0.00002290913,0.0000180563,0.00004663565,0.00004899185,0.00002717881],"domain_scores_gemma":[0.9997615,0.00004470757,0.0001101245,0.00001634626,0.00003062035,0.00003667555],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001120719,0.0001168271,0.2974187,0.0001190005,0.0001421118,0.001122099,0.0004513127,0.0003710472,0.683832,0.0002327368,0.0002729176,0.01480051],"study_design_scores_gemma":[0.00002372706,0.0001602147,0.9725676,0.00002958552,0.0000666336,0.001859426,0.0002989967,0.001024324,0.02205118,0.0001297618,0.001777046,0.00001160595],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990237,0.0001567943,0.0002257634,0.00002179899,0.000004551972,0.000007581503,0.000311851,0.000003862991,0.0002441056],"genre_scores_gemma":[0.9989991,0.00005588111,0.0003843358,0.00002399912,0.000002803737,0.000006639721,0.0003341369,0.0000028017,0.0001903074],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001809957,"threshold_uncertainty_score":0.003598869,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01666544197791635,"score_gpt":0.2448539561269554,"score_spread":0.2281885141490391,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}