{"id":"W3020745903","doi":"10.1101/761874","title":"Ultra-Conserved Elements and morphology reciprocally illuminate conflicting phylogenetic hypotheses in Chalcididae (Hymenoptera, Chalcidoidea)","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Hymenoptera taxonomy and phylogeny","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Phylogenetic tree; Biology; Taxon; Tree (set theory); Evolutionary biology; Morphology (biology); Ecology; Zoology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005810587,0.0001908446,0.0003406347,0.001536453,0.0005528895,0.0007228188,0.0003400555,0.0003633394,0.001809234],"category_scores_gemma":[0.002369691,0.0001681808,0.0002165529,0.0009872909,0.0006793656,0.0006017516,0.0007572298,0.0003995019,0.000291349],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002064372,"about_ca_system_score_gemma":0.0001478506,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004638711,"about_ca_topic_score_gemma":0.001158837,"domain_scores_codex":[0.9995164,0.0001936813,0.00004254143,0.0001201512,0.00007645496,0.00005079572],"domain_scores_gemma":[0.9980816,0.001156249,0.0003595263,0.0001503955,0.0001508821,0.0001013323],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001227651,0.0001199644,0.5251013,0.0007256808,0.0004464361,0.001131399,0.00450332,0.002458737,0.389562,0.004532033,0.0005598743,0.06963161],"study_design_scores_gemma":[0.00002452235,0.0001649725,0.960952,0.000139301,0.0002004657,0.001114192,0.003103976,0.01096227,0.01413349,0.004732414,0.00442731,0.0000450756],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957461,0.0002564632,0.003134064,0.0000272568,0.000003331731,0.000005294632,0.000162553,0.00002740012,0.000637528],"genre_scores_gemma":[0.9974207,0.00003962677,0.002124444,0.00002703512,0.000003645042,0.000006331262,0.0002383909,0.0000114607,0.0001283763],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001809234,"threshold_uncertainty_score":0.006052494,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02332877233365443,"score_gpt":0.2163396312014902,"score_spread":0.1930108588678358,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}