{"id":"W3021246481","doi":"10.1101/2020.04.29.068189","title":"Gene expression profiling reveals subgenome dominance during <i>Brassica napus</i> seed development","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Endosperm; Genetics; Gene; Transcription factor; Genome; Gene expression; Gene expression profiling; Gene knockdown; Regulation of gene expression; Embryo","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006223231,0.0001949657,0.0001640094,0.0003075527,0.00015059,0.000297031,0.0001056384,0.0001358752,0.0005990823],"category_scores_gemma":[0.0000700338,0.0001391313,0.0001937382,0.0002052271,0.0001279305,0.0001459248,0.0001137047,0.0002932741,0.0002594962],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003263082,"about_ca_system_score_gemma":0.0001431663,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003082863,"about_ca_topic_score_gemma":0.004747855,"domain_scores_codex":[0.9999259,0.000004573566,0.000002489272,0.00003347537,0.00001998982,0.00001352078],"domain_scores_gemma":[0.999907,0.00001798508,0.00003137205,0.000006816714,0.00001812431,0.00001872487],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002231066,0.000001564239,0.0005161562,0.000009430552,0.000001757663,0.000008144149,0.00001163581,0.00001976298,0.9989052,0.00001241588,0.0000153969,0.0004762088],"study_design_scores_gemma":[0.00001054315,0.0002238488,0.2790434,0.00001257302,0.00004175006,0.0002718899,0.0002068063,0.002372017,0.7138526,0.0001230809,0.003823894,0.0000174738],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9924344,0.0009953014,0.002889167,0.00007648923,0.000006595372,0.00001567781,0.002248856,0.0001268234,0.001206692],"genre_scores_gemma":[0.9908729,0.0005505528,0.002748208,0.0001110505,0.000007277166,0.00003352461,0.00330856,0.00005161339,0.002316236],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003082863,"threshold_uncertainty_score":0.006129861,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01651120551301528,"score_gpt":0.1964586379931502,"score_spread":0.179947432480135,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}