{"id":"W3021852814","doi":"10.1101/2020.05.01.072959","title":"<i>Actinobacillus</i> utilizes a binding-protein dependent ABC transporter to acquire Vitamin B <sub>6</sub>","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Hospital for Sick Children; Keio University","keywords":"Operon; Periplasmic space; ATP-binding cassette transporter; Biochemistry; Chemistry; Permease; Isothermal titration calorimetry; Transport protein; Bacterial outer membrane; Biology; Escherichia coli; Transporter; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005060508,0.0002668071,0.0001429793,0.0000847842,0.0001500951,0.0002903565,0.0001516815,0.0001717922,0.0003337525],"category_scores_gemma":[0.00009896012,0.0001008777,0.0001621897,0.0001377965,0.0001374796,0.0001400364,0.0001656016,0.0002570219,0.0002201],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002729066,"about_ca_system_score_gemma":0.0002151508,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003522307,"about_ca_topic_score_gemma":0.002260674,"domain_scores_codex":[0.9999386,0.00001127851,0.000004800239,0.00001088966,0.00001886468,0.00001564617],"domain_scores_gemma":[0.9999645,0.000005107763,0.000009931969,0.000004837806,0.000006702909,0.000009022211],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004502365,0.00002058013,0.0007085424,0.00001738493,0.000003232641,0.0000756772,0.00001031129,0.0001477368,0.9981108,0.0001280527,0.00002694095,0.0007057986],"study_design_scores_gemma":[0.000009465724,0.0001409857,0.007518391,0.000007321259,0.00001473904,0.0003631122,0.00006862241,0.004770085,0.9851424,0.00008786051,0.001870272,0.000006573395],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964929,0.0001437695,0.002367371,0.00005802134,0.000006307194,0.000008102228,0.00008367568,0.00006644038,0.00077346],"genre_scores_gemma":[0.9956927,0.0001072247,0.003217987,0.00001753845,0.000001599631,0.00000574491,0.0002531009,0.00001147541,0.0006926659],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003522307,"threshold_uncertainty_score":0.007003605,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01046517073270553,"score_gpt":0.202246821443317,"score_spread":0.1917816507106115,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}