{"id":"W3023147200","doi":"10.1101/2020.05.01.20088054","title":"The landscape of host genetic factors involved in immune response to common viral infections","year":2020,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Biology; Human leukocyte antigen; Virology; Immune system; Immunology; Virus; Antibody; Genetics; Antigen","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007170556,0.0002127003,0.0003829504,0.000083598,0.00009276644,0.00001684851,0.0004242778,0.0003573619,0.000007912012],"category_scores_gemma":[0.001295898,0.0001693434,0.0001763313,0.0001484697,0.00007707836,7.527964e-7,0.0007263149,0.0003223016,0.000007934354],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002597869,"about_ca_system_score_gemma":0.0001588319,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002733653,"about_ca_topic_score_gemma":0.0007494424,"domain_scores_codex":[0.998021,0.0006560695,0.0005637849,0.0003876081,0.0001030154,0.0002685209],"domain_scores_gemma":[0.9987506,0.0002065944,0.0002466088,0.0006329528,0.00007725219,0.00008605141],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001696004,0.00004615526,0.8501196,0.00001480619,0.00007048972,0.000001317868,0.00017858,0.00133404,0.1474255,0.000008420245,0.0004326173,0.0001989348],"study_design_scores_gemma":[0.0002226529,0.0003529493,0.9854985,0.00001843694,0.00001974971,6.70993e-7,0.0001404909,0.0001448692,0.007008128,0.0002057604,0.006218029,0.0001697274],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959683,0.001010721,0.0003236173,0.001791819,0.0003730103,0.000355998,0.00006280082,0.000009833748,0.0001038509],"genre_scores_gemma":[0.9986863,0.0004881068,0.0002860147,0.0001250134,0.00009113245,0.0000785615,0.0001138899,0.00002472281,0.0001062983],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1404173,"threshold_uncertainty_score":0.6905624,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.018393478343776,"score_gpt":0.2758015779952009,"score_spread":0.2574080996514249,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}