{"id":"W3023171613","doi":"10.1007/s00284-020-01996-3","title":"Parvibaculum sedimenti sp. nov., A Novel Soil Bacterium Isolated from Sediment","year":2020,"lang":"en","type":"article","venue":"Current Microbiology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"ca_institutions":"Ministry of Agriculture","funders":"Key Laboratory on Development and Application of Rural Renewable Energy; Jiangsu Planned Projects for Postdoctoral Research Funds; China Postdoctoral Science Foundation; National Natural Science Foundation of China","keywords":"16S ribosomal RNA; Phylogenetic tree; Biology; Strain (injury); Bacteria; Microbiology; Soil microbiology; Gene; Botany; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00006172089,0.0003080968,0.0003152372,0.00002400657,0.00008960337,0.00002126283,0.0003063209,0.0001869078,0.00009825312],"category_scores_gemma":[0.00002282209,0.0002920486,0.0001545577,0.00007975812,0.0001219097,9.626372e-7,0.0004432987,0.0001553496,0.0001234544],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000156374,"about_ca_system_score_gemma":0.00006971934,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002178437,"about_ca_topic_score_gemma":0.00001637293,"domain_scores_codex":[0.9984454,0.0000514682,0.0003369505,0.000700494,0.00004030373,0.0004253871],"domain_scores_gemma":[0.9993183,0.0000124196,0.0001332476,0.0003019057,0.00008325539,0.0001508965],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001045164,0.0001228005,0.002508187,0.00001549653,0.0002209472,0.000001217281,0.0001527604,0.00002421314,0.9869623,0.00001101041,0.009047194,0.0008294107],"study_design_scores_gemma":[0.001508334,0.0003884067,0.001739269,0.00001341972,0.00007612302,0.00001140974,0.0000599351,0.0001100241,0.3880698,0.00001185537,0.6075612,0.0004501873],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9880427,0.006596092,0.001893601,0.0009243847,0.00140938,0.0002479189,0.0007498032,0.00001534232,0.0001207797],"genre_scores_gemma":[0.9952328,0.0005122021,0.0004890253,0.001343396,0.0008497448,0.00002588147,0.00146719,0.00003347699,0.00004633655],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5988925,"threshold_uncertainty_score":0.9999532,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01969433485886237,"score_gpt":0.2318361552257187,"score_spread":0.2121418203668563,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}