{"id":"W3023194244","doi":"10.1111/ajt.15980","title":"Intragraft gene expression in native kidney BK virus nephropathy versus T cell–mediated rejection: Prospects for molecular diagnosis and risk prediction","year":2020,"lang":"en","type":"article","venue":"American Journal of Transplantation","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"ca_institutions":"Dalhousie University; University of Alberta","funders":"","keywords":"Medicine; Polyomavirus Infections; BK virus; Cohort; Immunosuppression; Nephropathy; Immunology; Biopsy; Gene expression; Gene; Internal medicine; Kidney; Kidney transplantation; Biology; Endocrinology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007683032,0.0002108209,0.0003548588,0.0005843767,0.000170093,0.001073508,0.000228973,0.0005612671,0.0006930098],"category_scores_gemma":[0.0008402026,0.0000943445,0.0001752808,0.0003908102,0.0003648594,0.0005777202,0.0002210101,0.0005631504,0.000146158],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002485356,"about_ca_system_score_gemma":0.0002285437,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005304233,"about_ca_topic_score_gemma":0.0003778281,"domain_scores_codex":[0.9997738,0.0000847027,0.00001395179,0.00005540653,0.00002893442,0.00004317305],"domain_scores_gemma":[0.9995841,0.0001694596,0.00009525189,0.00002817147,0.000049304,0.00007364877],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.005832353,0.0003997835,0.6533045,0.0001455814,0.0001175218,0.0005165974,0.0003122277,0.0007410052,0.2711318,0.00248733,0.0004257179,0.06458575],"study_design_scores_gemma":[0.00006433201,0.001057675,0.9155055,0.00006086588,0.0002768835,0.001308095,0.0007216124,0.01028261,0.06384561,0.003986014,0.002852631,0.00003819569],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.990683,0.004040484,0.003411766,0.0003204747,0.00005069195,0.00001268013,0.000165325,0.0000191602,0.001296499],"genre_scores_gemma":[0.9971213,0.0009145326,0.001224497,0.00006787284,0.00007276153,0.000008473944,0.0001106752,0.000005977245,0.0004739147],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001073508,"threshold_uncertainty_score":0.004063249,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008587585776514325,"score_gpt":0.2440015341597473,"score_spread":0.235413948383233,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}