{"id":"W3023840458","doi":"10.1186/s40168-020-00804-1","title":"The neovaginal microbiome of transgender women post-gender reassignment surgery","year":2020,"lang":"en","type":"article","venue":"Microbiome","topic":"Sexual function and dysfunction studies","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Mental Health; National Institute of Allergy and Infectious Diseases; National Institute of Child Health and Human Development; Canadian Institutes of Health Research; National Institutes of Health; International Maternal Pediatric Adolescent AIDS Clinical Trials Network","keywords":"Roseburia; Biology; Prevotella; Microbiome; Peptostreptococcus; Bacterial vaginosis; Gynecology; Zoology; Lactobacillus; Physiology; Internal medicine; Gastroenterology; Microbiology; Bacteroides; Bioinformatics; Genetics; Medicine; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003215892,0.0002559474,0.0004148518,0.0005037424,0.0005625334,0.0007454721,0.0001937786,0.0003703497,0.002812053],"category_scores_gemma":[0.001172131,0.0001390922,0.0002791915,0.0005513703,0.0003462371,0.0002986279,0.0006682265,0.0003917044,0.0004901467],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000241442,"about_ca_system_score_gemma":0.0004290407,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002890062,"about_ca_topic_score_gemma":0.003852923,"domain_scores_codex":[0.999718,0.00008334056,0.00001533466,0.00005551144,0.00005646461,0.00007129292],"domain_scores_gemma":[0.9997001,0.00006317945,0.00008606272,0.00001511188,0.00007757595,0.00005801179],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001591124,0.0001836983,0.8510177,0.0009018885,0.0002101677,0.002123757,0.005262036,0.0001967907,0.06252848,0.0001857655,0.002084079,0.0737145],"study_design_scores_gemma":[0.0000139134,0.0007176929,0.9656339,0.000449094,0.0001188257,0.003424662,0.01558835,0.0003322833,0.005067416,0.0003527627,0.008260866,0.0000401982],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9933428,0.003111655,0.0003219317,0.0004476315,0.00005035167,0.00002801429,0.001481565,0.000009057223,0.001206993],"genre_scores_gemma":[0.9937152,0.002524117,0.0008859567,0.0005470163,0.00004330179,0.00004768697,0.001083917,0.00001127886,0.001141514],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002890062,"threshold_uncertainty_score":0.009407282,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06016876579404181,"score_gpt":0.2540563033609474,"score_spread":0.1938875375669055,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}