{"id":"W3025364456","doi":"10.1371/journal.ppat.1008565","title":"Family-based genome-wide association study of leprosy in Vietnam","year":2020,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Leprosy Research and Treatment","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Order of Malta; Agence Nationale de la Recherche","keywords":"Leprosy; Genome-wide association study; Single-nucleotide polymorphism; Genetics; Biology; Genetic association; Genetic predisposition; Human leukocyte antigen; Haplotype; Population; Allele; Gene; Medicine; Immunology; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001782812,0.0001088121,0.0003257937,0.00008271727,0.00002758351,0.00000767396,0.00006296,0.00005504194,0.00004905479],"category_scores_gemma":[0.0006494539,0.00009131015,0.00006786408,0.0003401318,0.00001018109,0.00002813206,0.00003203969,0.0001589249,0.00008210664],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002419237,"about_ca_system_score_gemma":0.0001432118,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003163655,"about_ca_topic_score_gemma":0.0000291811,"domain_scores_codex":[0.9986004,0.00009108625,0.0002628301,0.0002626008,0.0005317032,0.0002513311],"domain_scores_gemma":[0.9993058,0.000112611,0.00008279683,0.0002083544,0.0001183055,0.0001720951],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002188344,0.002699051,0.9413031,0.00008526593,0.0001282676,0.000224822,0.001181225,0.00002287303,0.05385969,9.214176e-7,0.00005164474,0.0002242879],"study_design_scores_gemma":[0.005502378,0.00276122,0.9838283,0.00002771254,0.0001215093,1.879254e-7,0.000696054,0.0004556608,0.006411298,0.000006849573,0.0001054345,0.0000834176],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962305,0.000113688,0.00001341051,0.001607203,0.00001359234,0.001238141,0.00004276613,0.00003697339,0.0007036852],"genre_scores_gemma":[0.9988418,0.00001210406,0.0002452934,0.0006261906,0.00004865642,0.0001029705,0.00004279984,0.00001841627,0.00006173702],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04744839,"threshold_uncertainty_score":0.372352,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04824811085630795,"score_gpt":0.2829224533685032,"score_spread":0.2346743425121953,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}