{"id":"W3025751469","doi":"10.1101/2020.05.14.095489","title":"Conservation and host-specific expression of non-tandemly repeated heterogenous ribosome RNA gene in arbuscular mycorrhizal fungi","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Accelerated Innovation Research Initiative Turning Top Science and Ideas into High-Impact Values; National Institute for Basic Biology; Institute of Genetics; Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Biology; Rhizophagus irregularis; Ribosomal RNA; Genetics; Genome; Gene; Ribosome; Phylogenetic tree; Evolutionary biology; RNA; Arbuscular mycorrhizal; Symbiosis; Bacteria","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009374456,0.0001895493,0.0001716548,0.0004011354,0.0001221033,0.00022355,0.0001055075,0.0002188451,0.000542393],"category_scores_gemma":[0.0001485169,0.0001341227,0.000158869,0.000184839,0.0001566376,0.0001065122,0.0001692069,0.0002436892,0.0002665815],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001208272,"about_ca_system_score_gemma":0.00006890373,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003732665,"about_ca_topic_score_gemma":0.0006045169,"domain_scores_codex":[0.9998553,0.000016076,0.000009312704,0.00006541146,0.00002634027,0.00002752931],"domain_scores_gemma":[0.9998029,0.0000368136,0.00007806382,0.00002065926,0.00001896987,0.00004260124],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002389604,0.000003694798,0.0007631857,0.000006566006,0.000001603422,0.00001644594,0.00001298632,0.000008998833,0.9987994,0.00001559995,0.000003853949,0.0003437222],"study_design_scores_gemma":[0.0000217159,0.0004225688,0.5205411,0.00001651605,0.00003583749,0.001020673,0.0002240628,0.002322321,0.4733607,0.0001227067,0.001894957,0.00001674114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982846,0.0003363508,0.0007074888,0.00001208164,0.000002600719,0.000004158424,0.0002413328,0.00001943326,0.0003918326],"genre_scores_gemma":[0.9980562,0.00008173216,0.0006315585,0.00001296264,0.000004057862,0.000008190276,0.0005454072,0.00001042044,0.0006496143],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000542393,"threshold_uncertainty_score":0.001814544,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01585941453667659,"score_gpt":0.196250345822311,"score_spread":0.1803909312856344,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}