{"id":"W3026161434","doi":"10.1111/mec.15480","title":"Divergent and linked selection shape patterns of genomic differentiation between European and North American Atlantic salmon (<i>Salmo salar</i>)","year":2020,"lang":"en","type":"article","venue":"Molecular Ecology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"Memorial University of Newfoundland; Dalhousie University; Fisheries and Oceans Canada","funders":"Fisheries and Oceans Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Salmo; Evolutionary biology; Linkage disequilibrium; Selective sweep; Genetics; Genetic divergence; Single-nucleotide polymorphism; Gene flow; Balancing selection; Gene; Genetic variation; Allele; Genetic diversity; Haplotype; Population; Genotype; Fishery","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002552925,0.00008389685,0.0001907719,0.0006762068,0.0002319402,0.0004525807,0.0001621535,0.0002315718,0.001460147],"category_scores_gemma":[0.0005358201,0.0001080732,0.0002522461,0.0005935608,0.0004463298,0.0001536268,0.0004078899,0.0002364253,0.0001449156],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000174194,"about_ca_system_score_gemma":0.0001253985,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004515075,"about_ca_topic_score_gemma":0.007925466,"domain_scores_codex":[0.9998537,0.00003357247,0.00001066327,0.00005958794,0.00002108461,0.00002140356],"domain_scores_gemma":[0.9995657,0.0001719649,0.0001120159,0.00003172263,0.00006320343,0.00005547292],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000441314,0.00005084686,0.8006425,0.00005675347,0.0003180419,0.0001184004,0.000938477,0.001150708,0.1856066,0.0003455137,0.0001823539,0.01014846],"study_design_scores_gemma":[0.000005159908,0.00002391861,0.9980853,0.000003167552,0.00002435062,0.00003322427,0.000207465,0.0006803042,0.0007395095,0.00009904804,0.00009503444,0.000003542621],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996732,0.00002191831,0.0000949567,0.000006995805,3.976409e-7,6.12938e-7,0.00006053784,0.000002582831,0.0001388891],"genre_scores_gemma":[0.9996382,0.00001230022,0.0001143754,0.00001342542,9.843004e-7,0.000001452919,0.0001477844,0.000002335152,0.00006915077],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004515075,"threshold_uncertainty_score":0.008977592,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01018349380405708,"score_gpt":0.2017500272401364,"score_spread":0.1915665334360793,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}