{"id":"W3027390390","doi":"10.1093/gbe/evaa108","title":"Complete Mitochondrial Genome of a Gymnosperm, Sitka Spruce (Picea sitchensis), Indicates a Complex Physical Structure","year":2020,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":160,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre; Université Laval; Genome British Columbia","funders":"Genome Alberta; Genome British Columbia; Genome Canada","keywords":"Biology; Genome; Mitochondrial DNA; Gymnosperm; Genetics; Genome size; Evolutionary biology; Gene; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003707146,0.0002021613,0.0003302211,0.00002743728,0.0001285504,0.000007114566,0.0001663999,0.0001845121,0.0000154568],"category_scores_gemma":[0.00003590997,0.000184866,0.00009462111,0.00009247415,0.0003181534,0.000001285637,0.0002268234,0.00009887172,0.000006555963],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001200635,"about_ca_system_score_gemma":0.0000389575,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002531269,"about_ca_topic_score_gemma":0.00001892011,"domain_scores_codex":[0.9989375,0.00007187716,0.0002272364,0.0004458606,0.00005769915,0.000259768],"domain_scores_gemma":[0.9994971,0.00001622991,0.0001362996,0.000170459,0.00007546526,0.0001044374],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001816936,0.0000247114,0.01372376,0.00002708342,0.000154498,5.513546e-7,0.0003640855,0.00007209652,0.984875,0.0004215902,0.00005006179,0.0001049028],"study_design_scores_gemma":[0.00182482,0.001902575,0.9413284,0.000005064765,0.0001628425,0.00002524226,0.0002903428,0.0003472257,0.02799263,0.002636361,0.02287714,0.0006073804],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952257,0.002690633,0.0007386918,0.0003509043,0.00009604951,0.0002093594,0.000613827,0.000006265686,0.00006857818],"genre_scores_gemma":[0.9973093,0.0001471054,0.0009551307,0.000285343,0.0008098272,0.000006319866,0.0004641329,0.00001393266,0.00000890791],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9568824,"threshold_uncertainty_score":0.7538615,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01578817432420364,"score_gpt":0.2328093170309573,"score_spread":0.2170211427067537,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}