{"id":"W3027888601","doi":"10.1101/2020.05.18.101246","title":"The minor and major spliceosome interact to regulate alternative splicing around minor introns","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"National Institutes of Health; National Institute of Neurological Disorders and Stroke; University of Toronto; University of Connecticut","keywords":"Spliceosome; Minor spliceosome; Intron; RNA splicing; Exon; Biology; Alternative splicing; Genetics; Gene isoform; Cell biology; Gene; RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001782057,0.0003164215,0.0001851696,0.0001716964,0.0002371649,0.0004833337,0.0001858049,0.0002943234,0.001674492],"category_scores_gemma":[0.0001555171,0.0002278714,0.000266214,0.0001000738,0.0002436762,0.0002453203,0.0004189354,0.0003358358,0.0009611566],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003052444,"about_ca_system_score_gemma":0.00017369,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003319761,"about_ca_topic_score_gemma":0.0007338302,"domain_scores_codex":[0.999856,0.000016212,0.000009446914,0.0000460417,0.0000363873,0.00003590413],"domain_scores_gemma":[0.9998541,0.0000221266,0.00004360688,0.00002014831,0.00001819545,0.0000417757],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009177754,0.000009219048,0.0007947261,0.00001867932,0.000003102728,0.00009920897,0.00001616362,0.00005970649,0.9969735,0.0006054838,0.0000802154,0.001248261],"study_design_scores_gemma":[0.00001939334,0.0001059033,0.01654504,0.000009188403,0.00001371734,0.000481716,0.00005170906,0.00419356,0.9740724,0.0005679031,0.003932826,0.000006752341],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9836633,0.0008704265,0.01140754,0.0001291418,0.00005288418,0.0000132298,0.0001625286,0.0002392355,0.003461712],"genre_scores_gemma":[0.9901661,0.0001793116,0.004124171,0.0000538729,0.00001961498,0.00001049064,0.0003577122,0.0000762987,0.005012464],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001674492,"threshold_uncertainty_score":0.005601764,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01317213015775462,"score_gpt":0.2504321372121036,"score_spread":0.237260007054349,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}