{"id":"W3028431669","doi":"10.2140/memocs.2020.8.101","title":"Genotype-dependent virus distribution and competition of virus strains","year":2020,"lang":"en","type":"article","venue":"Mathematics and Mechanics of Complex Systems","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"College of Engineering, Michigan State University; University of North Carolina at Chapel Hill; Universität Duisburg-Essen; Michigan State University; RUDN University; Russian Science Foundation; Akademie Věd České Republiky; Bilkent Üniversitesi; Freie Universität Berlin; Università degli Studi dell'Aquila; Centre National de la Recherche Scientifique; Universität zu Köln; Vanderbilt University; Università degli Studi di Pavia; Université de Lyon; Universität Wien; McGill University; Universidad Rey Juan Carlos; Louisiana State University; Otto von Guericke University Magdeburg; University of Pittsburgh; Indian National Science Academy; Carnegie Mellon University; Wayne State University","keywords":"Immune system; Virus; Biology; Genotype; Competition (biology); Virology; Strain (injury); Genetics; Gene; Ecology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007370703,0.0002242363,0.0005098095,0.0004376159,0.0004035598,0.0009717445,0.0006558179,0.0006218193,0.003502829],"category_scores_gemma":[0.004933652,0.0002078942,0.0003061914,0.0003377949,0.0008605681,0.0008422706,0.0004635153,0.0005784453,0.0003443655],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008124425,"about_ca_system_score_gemma":0.0003504129,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00104111,"about_ca_topic_score_gemma":0.001104078,"domain_scores_codex":[0.9996747,0.0001017847,0.00000935235,0.00009075651,0.0000657007,0.00005784254],"domain_scores_gemma":[0.9977629,0.001497989,0.0002137252,0.00008950184,0.0001900895,0.0002458107],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0007070657,0.0002191664,0.0410231,0.0004442581,0.0001506784,0.0008990443,0.0005548055,0.1832934,0.3704863,0.3520827,0.005975357,0.04416412],"study_design_scores_gemma":[0.00005435852,0.0001989162,0.06254771,0.00003011997,0.00004520753,0.0009673617,0.0004180717,0.6281368,0.03107396,0.2717214,0.004697815,0.000108267],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9261066,0.001159647,0.05658022,0.001362641,0.0001153352,0.00002125566,0.0001886985,0.00006622637,0.0143993],"genre_scores_gemma":[0.993899,0.000447296,0.001707477,0.00006839487,0.00004952918,0.00001151121,0.0000644028,0.00002184226,0.003730531],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003502829,"threshold_uncertainty_score":0.01171809,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02130228405089207,"score_gpt":0.2402155164059889,"score_spread":0.2189132323550968,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}