{"id":"W3029360037","doi":"10.1101/2020.05.28.20115931","title":"Sporadic Oncocytic Tumors with Features Intermediate between Oncocytoma and Chromophobe Renal Cell Carcinoma: Comprehensive Clinico-Pathological and Genomic Profiling","year":2020,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Oncocytoma; Biology; Chromophobe cell; Pathology; Clear cell; Immunohistochemistry; Monosomy; Mucoepidermoid carcinoma; Carcinoma; Chromosome; Karyotype; Medicine; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003246682,0.0001779807,0.0002176772,0.001395595,0.0003729046,0.0003637189,0.0001175863,0.0001504989,0.0006366346],"category_scores_gemma":[0.0007329244,0.0001709624,0.0001125165,0.0006685851,0.0002353428,0.0001628446,0.0003820227,0.00009691161,0.0001282633],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001688336,"about_ca_system_score_gemma":0.0002497323,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001106718,"about_ca_topic_score_gemma":0.002559267,"domain_scores_codex":[0.9997407,0.00004307205,0.00003513411,0.00006436749,0.0000631849,0.00005362239],"domain_scores_gemma":[0.9995348,0.0001393504,0.0001147012,0.00004782702,0.00008805548,0.00007514472],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002437598,0.00002514269,0.9167115,0.00004532778,0.00003751778,0.003015275,0.0002078369,0.0001645601,0.07225263,0.00004333633,0.00008202838,0.007170976],"study_design_scores_gemma":[0.000008975231,0.0001482362,0.975374,0.000006529832,0.00006284581,0.01455621,0.0004482084,0.0006262442,0.008104913,0.00007196113,0.0005844317,0.000007448773],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992973,0.0001398295,0.0003163746,0.000004486948,5.636177e-7,0.000006294303,0.00008314009,0.000009548731,0.0001425205],"genre_scores_gemma":[0.9991927,0.00005865653,0.0004889376,0.000004477416,0.000002199086,0.000005893974,0.0001949901,0.000002278564,0.00004992159],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001395595,"threshold_uncertainty_score":0.002200603,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04905912646406647,"score_gpt":0.2859099547548716,"score_spread":0.2368508282908051,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}