{"id":"W3030635482","doi":"10.1101/2020.05.25.113688","title":"Haplotype tagging reveals parallel formation of hybrid races in two butterfly species","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; Max-Planck-Gesellschaft; University of Calgary","keywords":"Biology; Heliconius; Hybrid zone; Haplotype; Evolutionary biology; Introgression; Genetics; Allele; Genetic variation; Gene; Gene flow","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000210222,0.0002907342,0.0003708266,0.0001265514,0.00005701085,0.00005761347,0.0003775591,0.000172903,0.0000236512],"category_scores_gemma":[0.0001094918,0.0003333027,0.0001162149,0.0001519306,0.00006900681,0.00001286104,0.0004553468,0.0002721315,0.00001266012],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003563761,"about_ca_system_score_gemma":0.0001250729,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003684614,"about_ca_topic_score_gemma":0.000007079224,"domain_scores_codex":[0.9984751,0.0001019635,0.0004481906,0.0005083958,0.0002184226,0.0002479663],"domain_scores_gemma":[0.9987334,0.000009908415,0.0004212192,0.0005369178,0.0001979111,0.0001006613],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006844015,0.00002601818,0.02726436,0.0002949386,0.00005061779,0.00001325515,0.00001870075,0.001650921,0.9695941,0.0001889434,0.0008277845,0.000001890699],"study_design_scores_gemma":[0.0008403278,0.00006705332,0.158456,0.0002112195,0.00006430248,4.577423e-8,0.00001212922,0.0004059371,0.8278759,0.0000224692,0.01147717,0.0005675073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938586,0.0005593774,0.004268449,0.0003129805,0.0003677823,0.0003519968,0.00022339,0.00003430526,0.00002311868],"genre_scores_gemma":[0.993345,0.0002631547,0.005782331,0.000281129,0.0002628461,0.00001565207,0.00000649759,0.00003339631,0.000009944304],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1417183,"threshold_uncertainty_score":0.9999119,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01869038333387843,"score_gpt":0.2312920887840254,"score_spread":0.212601705450147,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}