{"id":"W3031155112","doi":"10.1097/inf.0000000000002714","title":"Pseudomonas aeruginosa Isolates From a Cohort of Mexican Children With Cystic Fibrosis Show Adaptation to a Chronic Phenotype","year":2020,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Medical Research Council; Queen's University; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Queen's University Belfast","keywords":"Pseudomonas aeruginosa; Microbiology; Biology; Broth microdilution; Tobramycin; Phenotype; Genotype; Cystic fibrosis; Colistin; Virulence; Antibiotic resistance; Serotype; Antibiotics; Medical microbiology; Gentamicin; Bacteria; Minimum inhibitory concentration; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001930763,0.0003057798,0.0002622468,0.0005842012,0.0005346083,0.0004346034,0.0001934091,0.0003595647,0.001433797],"category_scores_gemma":[0.000944795,0.0002177428,0.0002238418,0.0003957986,0.0003423436,0.000252326,0.0003869554,0.0003360401,0.0001745072],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001950769,"about_ca_system_score_gemma":0.000212723,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005973757,"about_ca_topic_score_gemma":0.005079206,"domain_scores_codex":[0.9998146,0.00002731766,0.00001376947,0.00005399739,0.00004123774,0.00004911658],"domain_scores_gemma":[0.9995553,0.00006029822,0.0001947115,0.00003985613,0.00006095072,0.00008883396],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007742821,0.00002707376,0.9949531,0.000008334833,0.00001395463,0.0004173542,0.0002612387,0.00001285812,0.00298832,0.000007402409,0.00008122644,0.00115168],"study_design_scores_gemma":[0.000004102435,0.00009671701,0.9975509,0.000003604903,0.0000115531,0.001635417,0.000368531,0.00003804688,0.0001493179,0.000003908594,0.0001360866,0.00000188452],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9998026,0.00003778355,0.00002687206,0.00001067999,9.20514e-7,0.000003453148,0.00005955859,0.00000136407,0.0000566749],"genre_scores_gemma":[0.9996284,0.00006256426,0.00007139723,0.0000156989,0.000003967963,0.000007641465,0.0001457497,0.000001406864,0.00006317878],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005973757,"threshold_uncertainty_score":0.01187795,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005152150975359472,"score_gpt":0.1981524384006595,"score_spread":0.1930002874253,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}