{"id":"W3032072823","doi":"10.1186/s42523-020-00025-9","title":"Metagenomic analysis suggests broad metabolic potential in extracellular symbionts of the bivalve Thyasira cf. gouldi","year":2020,"lang":"en","type":"article","venue":"Animal Microbiome","topic":"Marine Biology and Ecology Research","field":"Earth and Planetary Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Metagenomics; Ciona intestinalis; Symbiosis; Evolutionary biology; Gene; Ecology; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001610085,0.000468131,0.0003272528,0.001609271,0.0004151968,0.0005898443,0.000187299,0.0004024453,0.001030573],"category_scores_gemma":[0.0002916977,0.0001860385,0.0004867152,0.000938901,0.0002191295,0.0003580299,0.0006545207,0.0003119846,0.0002962755],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002054687,"about_ca_system_score_gemma":0.0002267829,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00109008,"about_ca_topic_score_gemma":0.001996679,"domain_scores_codex":[0.999817,0.000009955394,0.00001496977,0.0000858701,0.00003508683,0.000037161],"domain_scores_gemma":[0.9997556,0.00004224334,0.00006560696,0.00002430286,0.00005549394,0.00005676477],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002571607,0.00003279874,0.04777782,0.0001624376,0.00005954846,0.0001209793,0.0002877117,0.0001356349,0.9444621,0.00007229654,0.00005613882,0.006575492],"study_design_scores_gemma":[0.00001454552,0.0003839568,0.9305236,0.00005335857,0.0002716406,0.001063204,0.0007061255,0.001207074,0.06227208,0.0002774646,0.003196499,0.00003045108],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940284,0.0007483856,0.001114822,0.00004144299,0.000004693753,0.00001848127,0.003291495,0.00003030944,0.0007218525],"genre_scores_gemma":[0.9907956,0.0003434031,0.002374677,0.00006305174,0.000007316331,0.00003491565,0.005830818,0.00001872018,0.0005316122],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001609271,"threshold_uncertainty_score":0.003447592,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01503272289545445,"score_gpt":0.2212100096041532,"score_spread":0.2061772867086987,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}