{"id":"W3032195059","doi":"10.22215/etd/2019-13926","title":"Secondary Metabolite Biosynthesis during Vegetative Incompatibility in Cryphonectria parasitica, Causal Agent of the American Chestnut Blight","year":2019,"lang":"en","type":"dissertation","venue":"","topic":"Plant and Fungal Interactions Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Carleton University","funders":"","keywords":"Cryphonectria; Secondary metabolite; Biology; Secondary metabolism; Mating type; Heterokaryon; Chestnut blight; Transcriptome; Gene; Metabolite; Biosynthesis; Hypha; Biochemistry; Botany; Gene expression; Fungus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002128855,0.0002310587,0.0004311446,0.0001719093,0.00005481928,0.00001962813,0.0003223835,0.0001594835,0.00008847455],"category_scores_gemma":[0.000192088,0.0001685512,0.000212646,0.000274459,0.00009664995,0.000006059832,0.00007205099,0.0003844203,0.00002301778],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004713924,"about_ca_system_score_gemma":0.0002817553,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006712542,"about_ca_topic_score_gemma":0.002609046,"domain_scores_codex":[0.9984201,0.0002580748,0.0003943608,0.0004336496,0.0002283576,0.0002654936],"domain_scores_gemma":[0.9989724,0.00009288461,0.000271684,0.0004707889,0.0001397396,0.00005246787],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006055359,0.0001200816,0.01313865,0.0001607099,0.0001816545,0.000002675743,0.0002021109,0.0000110148,0.9847878,0.00002443867,0.00009295459,0.000672412],"study_design_scores_gemma":[0.0001531276,0.00004682818,0.3808646,0.00004005631,0.00002483049,0.000002244764,0.0003271413,0.00002973417,0.6180622,0.000007598167,0.0003150569,0.0001265437],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9915411,0.0004068055,0.000004496238,0.00003125164,0.0002912873,0.0003883247,0.0001593982,0.000004757368,0.007172608],"genre_scores_gemma":[0.9935561,0.0001943211,0.00006852775,0.00002414248,0.00005210992,0.00003711824,0.000637595,0.00002164487,0.005408423],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.367726,"threshold_uncertainty_score":0.6873317,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009611664720509809,"score_gpt":0.2975470076704571,"score_spread":0.2879353429499473,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}