{"id":"W3032903090","doi":"10.1093/cid/ciaa737","title":"Oral Capsulized Fecal Microbiota Transplantation for Eradication of Carbapenemase-producing <i>Enterobacteriaceae</i> Colonization With a Metagenomic Perspective","year":2020,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":67,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research","funders":"Johnson and Johnson; Human Frontier Science Program; Canadian Institute for Advanced Research","keywords":"Medicine; Microbiome; Carriage; Metagenomics; Enterobacteriaceae; Antibiotics; Internal medicine; Feces; Microbiology; Fecal bacteriotherapy; Antibiotic resistance; Biology; Clostridium difficile; Bioinformatics; Escherichia coli; Pathology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009958659,0.000367399,0.000537155,0.0002677793,0.0002918321,0.0007493183,0.0002094641,0.0002828756,0.001107544],"category_scores_gemma":[0.0007673261,0.0001594897,0.0004452165,0.0002108334,0.0002827726,0.0003174658,0.0004613995,0.0004185349,0.0001576201],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003441956,"about_ca_system_score_gemma":0.0006919628,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004102347,"about_ca_topic_score_gemma":0.0005685157,"domain_scores_codex":[0.9997308,0.00005841206,0.00001788152,0.00005870245,0.00005934935,0.00007484059],"domain_scores_gemma":[0.9994113,0.00007154905,0.0002527644,0.00005198438,0.00005010567,0.000162136],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01689406,0.003315287,0.7611187,0.0002848602,0.000371344,0.001050068,0.0004892325,0.0003604477,0.1114091,0.0001054798,0.000499715,0.1041017],"study_design_scores_gemma":[0.0003406892,0.03494573,0.9347768,0.0001294442,0.0005045784,0.002515094,0.0005741764,0.001934727,0.02262253,0.0001005112,0.001534613,0.00002103932],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992933,0.0003845768,0.0001570342,0.00002244475,0.000007371794,0.0000171555,0.00002137092,0.000004098266,0.00009253945],"genre_scores_gemma":[0.9993259,0.0001836553,0.0002575284,0.00003486807,0.0000111233,0.00001604028,0.00005772181,0.000002185942,0.0001111073],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001107544,"threshold_uncertainty_score":0.005266666,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04693117775281439,"score_gpt":0.3539256682931479,"score_spread":0.3069944905403335,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}