{"id":"W3032987257","doi":"10.1002/pros.24025","title":"Development and initial clinical correlation of a DNA methylation‐based blood test for prostate cancer","year":2020,"lang":"en","type":"article","venue":"The Prostate","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University; McMaster University","funders":"Prostate Cancer Canada","keywords":"Prostate cancer; DNA methylation; Methylation; Cancer; CpG site; Prostate; Cancer research; Medicine; Polymerase chain reaction; Oncology; Biology; Internal medicine; DNA; Gene; Genetics; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002020253,0.00007661957,0.0001032681,0.000008950414,0.00005981599,0.00001286095,0.00006092756,0.00004517187,0.000002977776],"category_scores_gemma":[0.0002984971,0.00006024459,0.00003493622,0.00004402504,0.00006930275,0.000001900927,0.00005158592,0.00004385899,7.46501e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000416018,"about_ca_system_score_gemma":0.0002290416,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008773269,"about_ca_topic_score_gemma":0.00003703882,"domain_scores_codex":[0.9993957,0.0000200919,0.0002585962,0.0001694558,0.00005443923,0.0001017246],"domain_scores_gemma":[0.9995214,0.0001131395,0.0001314587,0.000090191,0.0000917482,0.00005204043],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00388955,0.00053791,0.1061596,0.0005189746,0.0005247254,0.000004108661,0.006565106,0.005065965,0.6495785,0.0004015002,0.004454909,0.2222991],"study_design_scores_gemma":[0.005076305,0.001383208,0.01507561,0.00003995249,0.0002034884,0.000001607361,0.0001174943,0.008599935,0.880505,0.0003305751,0.08834265,0.0003242271],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994357,0.000592318,0.002565477,0.001496361,0.00008427241,0.0006099217,0.0002379929,0.000007596034,0.00004906429],"genre_scores_gemma":[0.9954168,0.0002667966,0.003091856,0.0007937878,0.0001411432,0.0001006576,0.0001303057,0.0000140978,0.00004461944],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2309264,"threshold_uncertainty_score":0.2456703,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03178129328922173,"score_gpt":0.315697426567317,"score_spread":0.2839161332780952,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}