{"id":"W3033408688","doi":"10.1101/2020.06.06.20123968","title":"Analysis of Hepatitis B virus genotype D in Greenland suggests presence of a novel subgenotype","year":2020,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Clade; Phylogenetic tree; Hepatitis B virus; Population; Biology; Genotype; Taxon; Sister group; Arctic; Evolutionary biology; Genetics; Virus; Gene; Demography; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001141109,0.0001408362,0.0001272905,0.0006633098,0.0004844506,0.0002882267,0.00007824239,0.0001423771,0.000766647],"category_scores_gemma":[0.0001725081,0.00009172366,0.000137924,0.000598239,0.0002448483,0.0001001283,0.0002846275,0.0001483573,0.000154526],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002741531,"about_ca_system_score_gemma":0.0002368269,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008638713,"about_ca_topic_score_gemma":0.02056102,"domain_scores_codex":[0.9999475,0.000007781076,0.000002983914,0.00002168316,0.000005871874,0.00001415022],"domain_scores_gemma":[0.999913,0.00001566173,0.00002895056,0.00001107602,0.00000920422,0.00002210985],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000467455,0.00002488474,0.8475459,0.00004274247,0.00005331597,0.0005727884,0.001574808,0.0001915358,0.1304042,0.0001903747,0.0001646346,0.01876728],"study_design_scores_gemma":[0.000004970083,0.0000709785,0.9939914,0.000008354355,0.00001857604,0.0006817075,0.0005780911,0.0002953224,0.002966633,0.00007339535,0.00130734,0.000003167141],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992511,0.00007882637,0.0001558381,0.00001414874,0.000001288466,0.000002435454,0.0001470191,0.00000282949,0.0003465649],"genre_scores_gemma":[0.9984708,0.00009338804,0.000541617,0.00003820569,0.000002194166,0.000002716779,0.0004822916,0.000003434357,0.0003653821],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008638713,"threshold_uncertainty_score":0.01717687,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04788592767194467,"score_gpt":0.3077381215301254,"score_spread":0.2598521938581807,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}