{"id":"W3033991991","doi":"10.1111/1462-2920.15113","title":"<scp>DNA</scp> <scp>tandem</scp> repeats contribute to the genetic diversity of <i>Brevibacterium aurantiacum</i> phages","year":2020,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biology; Prophage; Siphoviridae; Genome; Genetics; Tandem repeat; Integrase; Genome size; Virulence; Gene; Bacteriophage; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001290632,0.0003407685,0.0002748221,0.0009759548,0.000219647,0.0004731732,0.0001826633,0.0002877534,0.0006973167],"category_scores_gemma":[0.0004901658,0.0001601257,0.0003174268,0.0008173761,0.0002249215,0.000214678,0.0004057635,0.0003595186,0.0003748644],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001419907,"about_ca_system_score_gemma":0.0001693479,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007738778,"about_ca_topic_score_gemma":0.0006972456,"domain_scores_codex":[0.9997839,0.00002112733,0.00002007723,0.00006547107,0.00006080882,0.00004862187],"domain_scores_gemma":[0.9995147,0.0000829721,0.0001980196,0.00004706635,0.00007976336,0.00007754648],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002032642,0.00002322159,0.02246787,0.00008563943,0.00002373703,0.0002128014,0.0001840672,0.0001149261,0.968403,0.00005968501,0.00003975883,0.008181942],"study_design_scores_gemma":[0.00002280253,0.0004850826,0.6516774,0.00006592307,0.0001738207,0.004755591,0.0005970502,0.001533799,0.3329682,0.0003152831,0.007363911,0.0000411984],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997881,0.0004096726,0.0008348861,0.00002264177,0.000002808875,0.00000706512,0.0002879442,0.00003279067,0.0005211238],"genre_scores_gemma":[0.9975039,0.0001586997,0.0009969522,0.00001472601,0.000006735517,0.00000750705,0.0009886303,0.00001229343,0.0003104379],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009759548,"threshold_uncertainty_score":0.002332747,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008670283145612983,"score_gpt":0.1952297542242159,"score_spread":0.1865594710786029,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}