{"id":"W3034144845","doi":"10.1097/pap.0000000000000268","title":"Molecular Genetic Features of Primary Nonurachal Enteric-type Adenocarcinoma, Urachal Adenocarcinoma, Mucinous Adenocarcinoma, and Intestinal Metaplasia/Adenoma: Review of the Literature and Next-generation Sequencing Study","year":2020,"lang":"en","type":"review","venue":"Advances in Anatomic Pathology","topic":"Urinary and Genital Oncology Studies","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of British Columbia; University of Calgary; Royal Columbian Hospital","funders":"","keywords":"KRAS; Adenocarcinoma; PTEN; Medicine; Intestinal metaplasia; Pathology; Metaplasia; Cancer research; Internal medicine; Biology; Colorectal cancer; Cancer; Dysplasia; PI3K/AKT/mTOR pathway","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004735329,0.0008230489,0.004045528,0.0003892871,0.0001148621,0.00001671298,0.000443013,0.0004268029,0.000006916602],"category_scores_gemma":[0.000540752,0.0005837031,0.0003750304,0.0009425707,0.0007625159,0.0002241657,0.0006512538,0.001337885,0.000001958919],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002600999,"about_ca_system_score_gemma":0.0005171457,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000181322,"about_ca_topic_score_gemma":0.00002863326,"domain_scores_codex":[0.9953291,0.001134377,0.001561086,0.001166113,0.0003623196,0.0004470396],"domain_scores_gemma":[0.9974746,0.0003311443,0.001107376,0.000712038,0.0002298051,0.0001450899],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0006501975,0.001121693,0.1543469,0.2601736,0.001502674,0.0245646,0.008046072,0.000004810752,0.001046061,0.0001983193,0.0001486218,0.5481965],"study_design_scores_gemma":[0.009431922,0.025351,0.5007722,0.1878899,0.03315427,0.1915179,0.003713337,0.0001014117,0.0002831761,0.0004256354,0.04376126,0.003598015],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.1041578,0.8926384,0.000007041653,0.0001894128,0.0003595333,0.002451246,0.00005929941,0.00002031163,0.0001168842],"genre_scores_gemma":[0.1834378,0.8148957,0.0008508767,0.000401974,0.0001341059,0.0001215882,0.00007623061,0.00005434946,0.00002738029],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.5445985,"threshold_uncertainty_score":0.9996614,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04744496253186495,"score_gpt":0.3202148150998267,"score_spread":0.2727698525679618,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}