{"id":"W3034274180","doi":"10.3390/v12060645","title":"Quality Control of Next-Generation Sequencing-Based HIV-1 Drug Resistance Data in Clinical Laboratory Information Systems Framework","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Public Health Agency of Canada","funders":"","keywords":"HIV drug resistance; Human immunodeficiency virus (HIV); Quality (philosophy); Computer science; Data mining; Medicine; Data science; Viral load; Virology; Antiretroviral therapy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0130876,0.001052552,0.001813225,0.004312533,0.0004238632,0.002970407,0.002009961,0.001750766,0.002266402],"category_scores_gemma":[0.01024359,0.0003952365,0.001566894,0.003440449,0.001117829,0.002449644,0.001534713,0.002545891,0.001149751],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002406468,"about_ca_system_score_gemma":0.009953029,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004224286,"about_ca_topic_score_gemma":0.003277385,"domain_scores_codex":[0.9941531,0.002228743,0.0007890161,0.0003894683,0.002235442,0.0002041029],"domain_scores_gemma":[0.9915956,0.004937332,0.0009596205,0.0002534773,0.002070911,0.0001831569],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004633295,0.00007081639,0.0003801862,0.0432502,0.0002889668,0.0001117513,0.0002130358,0.001169634,0.001439053,0.03248921,0.01352148,0.9070194],"study_design_scores_gemma":[0.00002251092,0.0001627499,0.001259167,0.0283116,0.0004671861,0.0005162429,0.0001410525,0.0007919476,0.002126422,0.007973077,0.958182,0.00004608248],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002930906,0.9852178,0.007393971,0.002007467,0.0004785891,0.0001923162,0.0001427067,0.00007192747,0.004202218],"genre_scores_gemma":[0.004605901,0.9760416,0.01593082,0.001391019,0.00034955,0.0002415309,0.0004158984,0.00002200618,0.001001726],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.0130876,"threshold_uncertainty_score":0.0692147,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2480234086914881,"score_gpt":0.4199127119882753,"score_spread":0.1718893032967873,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}