{"id":"W3034887208","doi":"10.1128/mbio.00575-20","title":"Comparative Genomics Identified a Genetic Locus in Plant-Associated <i>Pseudomonas</i> spp. That Is Necessary for Induced Systemic Susceptibility","year":2020,"lang":"en","type":"article","venue":"mBio","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"China Postdoctoral Science Foundation; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Life Sciences Research Foundation","keywords":"Genomics; Computational biology; Biology; Locus (genetics); Genetics; Pseudomonas; Comparative genomics; Genome; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002417527,0.0004885549,0.0004124654,0.0004752039,0.0002370352,0.0004157004,0.0003211661,0.0004750635,0.001358016],"category_scores_gemma":[0.000274104,0.0001708303,0.0005598278,0.0002838885,0.0003525547,0.0001834423,0.0004870182,0.001142113,0.0005796741],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004791495,"about_ca_system_score_gemma":0.0004181574,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001188237,"about_ca_topic_score_gemma":0.001575997,"domain_scores_codex":[0.9997844,0.00002716642,0.00001927201,0.00006632477,0.00004833096,0.00005444209],"domain_scores_gemma":[0.9995831,0.0001287332,0.0001409312,0.00003473319,0.00002929129,0.00008318426],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005008277,0.00003773001,0.0003374847,0.0000215062,0.000006011798,0.00009566841,0.00001509273,0.00004024701,0.9981983,0.00009324963,0.0000199929,0.001084533],"study_design_scores_gemma":[0.00003651519,0.0007853946,0.1023144,0.00004954962,0.000121247,0.003335194,0.000342161,0.003034012,0.8847762,0.0005640472,0.004579212,0.0000620609],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9802426,0.0004107518,0.01442873,0.0002722727,0.00006748315,0.00007763523,0.001584665,0.0002541995,0.002661695],"genre_scores_gemma":[0.988917,0.0002419986,0.007026994,0.0002171375,0.00001946334,0.00003744023,0.002068967,0.0001221191,0.001348899],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001358016,"threshold_uncertainty_score":0.004542947,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06960959344273922,"score_gpt":0.2551670861571139,"score_spread":0.1855574927143747,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}