{"id":"W3035272613","doi":"10.1016/j.jprot.2020.103878","title":"Proteome of the fungus Phoma macdonaldii, the causal agent of black stem of sunflower","year":2020,"lang":"en","type":"article","venue":"Journal of Proteomics","topic":"Sunflower and Safflower Cultivation","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Alberta","funders":"Liaoning Revitalization Talents Program; Department of Science and Technology of Liaoning Province; Department of Education of Liaoning Province","keywords":"Proteome; Biology; Phoma; Sunflower; Proteomics; Fungus; KEGG; Computational biology; Pathogen; Genetics; Gene; Botany; Transcriptome; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000910036,0.0002505945,0.0002089287,0.0002079386,0.0002466125,0.000208821,0.0001034021,0.0002349534,0.0007979665],"category_scores_gemma":[0.0001406557,0.00009153406,0.000195985,0.0001433231,0.00008785734,0.0002681776,0.0001414016,0.0002808657,0.0002034561],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001764848,"about_ca_system_score_gemma":0.0001684381,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001608164,"about_ca_topic_score_gemma":0.001302123,"domain_scores_codex":[0.9999532,0.000003440108,0.000002169696,0.00001577235,0.00001294185,0.00001252031],"domain_scores_gemma":[0.9999201,0.00001725111,0.00001612969,0.000005729145,0.00001375263,0.00002711564],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001233231,0.000009144843,0.000517659,0.00002190462,0.000003906449,0.0000578107,0.00002279256,0.00001878932,0.9984689,0.00002354312,0.00004221256,0.0006900241],"study_design_scores_gemma":[0.00002446069,0.0004671505,0.3542034,0.0000230969,0.00006889564,0.001576892,0.000358904,0.002390227,0.6356445,0.0001715289,0.005051362,0.00001959362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969859,0.0005342927,0.0005966827,0.00006978259,0.00002330313,0.000005858861,0.00116645,0.00002111926,0.0005966002],"genre_scores_gemma":[0.9909288,0.000570702,0.00133757,0.00006812183,0.00002075309,0.000008931721,0.004638414,0.00001820117,0.002408385],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001608164,"threshold_uncertainty_score":0.00319767,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03370215871228353,"score_gpt":0.2095106436823337,"score_spread":0.1758084849700502,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}