{"id":"W3035401058","doi":"10.3201/eid2607.200187","title":"Lesions of <i>Mycobacterium avium</i> spp. <i>hominissuis</i> Infection Resembling <i>M. bovis</i> Lesions in a Wild Mule Deer, Canada1","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Shared Health; Canadian Science Centre for Human and Animal Health; University of Calgary; Parks Canada","funders":"Faculty of Veterinary Medicine, University of Calgary","keywords":"Mycobacterium bovis; Biology; Mycobacterium; Wildlife; Microbiology; Mycobacterium avium complex; Zoonosis; Lymph node; Virology; Tuberculosis; Veterinary medicine; Pathology; Mycobacterium tuberculosis; Bacteria; Medicine; Immunology; Ecology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002176703,0.0003836545,0.0007359617,0.0005013169,0.0002520235,0.00006160713,0.0001675937,0.0001573159,0.0004983991],"category_scores_gemma":[0.001755921,0.0003838098,0.0003385803,0.00157596,0.0001356265,0.0003234696,0.0001974277,0.0005339769,0.00007252019],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000210301,"about_ca_system_score_gemma":0.000733795,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01133696,"about_ca_topic_score_gemma":0.003105758,"domain_scores_codex":[0.9969422,0.0002088638,0.0007517613,0.0006435042,0.0006686981,0.0007849738],"domain_scores_gemma":[0.9975203,0.0003766713,0.0002144993,0.0004906866,0.0002838785,0.001113955],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004809511,0.0009730596,0.9425298,0.0007908531,0.0001181349,0.0002250761,0.0003748521,0.0002561405,0.01965016,0.00008038762,0.03130084,0.003219755],"study_design_scores_gemma":[0.008537895,0.002219479,0.8893262,0.001609347,0.0008364216,0.0001628063,0.0003710621,0.002110452,0.0218877,0.0001771881,0.07155082,0.001210693],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9906141,0.001017022,0.0002342783,0.003339057,0.0003984543,0.0008079672,0.0001773992,0.0003252387,0.003086537],"genre_scores_gemma":[0.9955002,0.001626255,0.00008217187,0.001802903,0.0004867699,0.0001584527,0.0001682861,0.00007886995,0.00009605988],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05320366,"threshold_uncertainty_score":0.9998614,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02467264038015728,"score_gpt":0.2934634579995483,"score_spread":0.2687908176193911,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}