{"id":"W3035719236","doi":"10.1038/s41467-020-16669-9","title":"Structure and mechanism of DNA delivery of a gene transfer agent","year":2020,"lang":"en","type":"article","venue":"Nature Communications","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":112,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"European Regional Development Fund; Natural Sciences and Engineering Research Council of Canada; Masarykova Univerzita; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Central European Institute of Technology; Grantová Agentura České Republiky; Ministerstvo Školství, Mládeže a Tělovýchovy; Nvidia; European Molecular Biology Organization","keywords":"Siphoviridae; DNA; Horizontal gene transfer; Biophysics; Biology; Gammaproteobacteria; Gene; Antiparallel (mathematics); Genetics; Chemistry; Bacteriophage; Genome; Escherichia coli; Physics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000147964,0.0002494931,0.0002307477,0.0002347738,0.000370018,0.0006318971,0.0005174342,0.0006839849,0.000841321],"category_scores_gemma":[0.0002220629,0.0002833534,0.0003897265,0.000128386,0.0005032996,0.0006220962,0.0003076785,0.0008079585,0.0007771086],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006560314,"about_ca_system_score_gemma":0.0003156081,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005715853,"about_ca_topic_score_gemma":0.0002077517,"domain_scores_codex":[0.9998838,0.000009632779,0.000005823507,0.00003808995,0.0000343907,0.00002823355],"domain_scores_gemma":[0.999863,0.00002073318,0.00003673253,0.00001922765,0.00001800234,0.00004232959],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006529492,0.00002979227,0.0003534555,0.00006795045,0.000008328532,0.0002087694,0.00005533301,0.0009254794,0.9932455,0.002097402,0.00005716934,0.002885599],"study_design_scores_gemma":[0.00004251959,0.0006912967,0.003567732,0.00002102389,0.00001749333,0.0003981024,0.0000640284,0.007867673,0.9805558,0.0006679476,0.006079125,0.00002720447],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9740182,0.002937469,0.01781826,0.0002239954,0.0000597755,0.00009859628,0.0001142051,0.0002526369,0.004476869],"genre_scores_gemma":[0.9875711,0.0009345725,0.008036349,0.00008319131,0.00001814259,0.00006104403,0.0001702398,0.00002706091,0.003098321],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000841321,"threshold_uncertainty_score":0.004759908,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01521898200334598,"score_gpt":0.2416141855019457,"score_spread":0.2263952034985997,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}